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Simple sequence repeat (SSR)
>UN11312
GCGACAAGGGATTTCACTTTCAAAACACACAGATAAAGGAGATCTTTAACAAAATATATTACAAGAATCAAAGCAATAACACACTTTTAACGCA
CTCTGACACCCTCGAACCAAACCAAACTACTCCATATACTCCAAAACAAGAGACCCCATTAAGATCTCCAGATTGATGGTGAAAGCACTTCTGC
ATGGTTTAGTGAGTTCTTGAAAATCATATCGCCAGCACTATGATAACAATCAGGAGTACGATACCAAAAATCACCATGAGCAAGCACATCTGCA
AGATAGAAAAAAAAGAACAACAGCAAGAATCATTTTATAGCTTGCTCTGATCATCATCCTAAATCCTCAAAAACGAATTAACAGAATGATCAAA
AGTTTTAATATCGTTTTTACCAGAGTAGAACTCGATCTTTGTGTCTTCGAAGCTTTTGCGAGATGAGATCTTCCTTGTGCCGTTGCAGCGTGGG
AGTTATCGATGTGAGTGCTAAATCATCGATCATGGTGCCTTGATCATGTACCAGAACAGCCAAGTCTTTGAAGATCTCGTGCACCTCGCCAATT
TGCTGCTGGATCTCTTGTATCCCTTGCTCTCTTTCCTCGATTATAGCTTCATTAAATACAATCTCATTGTCCAACAGTACAAGTTCTTGTCTTT
TGGATTCCACAAGAAGCGAACGCTGCTCTGGATGCTTATCTCCACTCACATCTATCTCACTGGATGTATAGCTAGATGGAGGAGAAGGATTGGT
GAAAAGAGGAGCATAGACAGTTTCTCTTTCAGCAGCGAGACGCTGAGCTTTTTGAAACTCTTTCAATACAGATTGAAAGTACTTCGCAAGCTTA
GCATCCACAATCTTCTTCCTTTGATCGACACCTCTTTGATGATCAGTTTCGCTAGCTTCTCTAAGTTTAACTGACGTGTCTTTCACCAACTCTC
CGATATGTAGTCTTGTCTTATGCAGCTTATCTCGGAGCTCCGGGGTGTCTTTGGGAGTACCGAGAGTGTTGACCAGACGGTGGAAGCTAGAGAC
GGCTGTGTTGATCTGGAATACACCGGAAGCCACGGCTTGCGTCGTGTCTTGTCTCCCTCCTCCTCCGTTGATGTAACTACTGGAAGAAGAAGCT
AACGGTCTTCCTCCTCTTCCTGCCTCTAAATCCTGAAAACTCATTTTCCCTTTCTTACTCGAGAAACCTCACTGCGAAAAAAGATTCGATCTTG
ACGGTAACGGAGATCGAGGGAGGAGCGAACGTGACGGTGAATTTTCGATTCGGCGGCGGAATTCTCTCTCTCTCCGACAGGATCAGATTGAGAA
AAAACGTGAATCCCGGGAAGAGAGAGAAGGTTGAGAAAACGTGAAGTGTCCC |
Primers for UN11312 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTCCTCCTCCGTTGATGTA |
60.065 |
20 |
TCTCTCTCTTCCCGGGATTC |
60.672 |
20 |
254 |
1090 |
1343 |
| 2 |
CGTGTCTTGTCTCCCTCCTC |
59.835 |
20 |
TCTCTCTCTTCCCGGGATTC |
60.672 |
20 |
267 |
1077 |
1343 |
| 3 |
TCGTGTCTTGTCTCCCTCCT |
59.835 |
20 |
TCTCTCTCTTCCCGGGATTC |
60.672 |
20 |
268 |
1076 |
1343 |
|
|
