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Simple sequence repeat (SSR)
>UN11332
GTCACAGACAATCTAAATCTTGAATTGTAAGCCATGTGAAAGCATCAAACACTTTGATCATGTTCAGAGCTATACTGTTAAACTTTTAAGAAAA
CAATAAATATAAACCAAGAATTGTCCAGTTTTACAGAGAGATCATCTTCCCCTACTTCTGACTGATGCTGCTGCTGCTGCAGCTTGTACTCTTC
TTTTTAAGCAGGTTTCCAAATTTTCGGAGCAGAGGTTTCTTCTTCTTCATATGTTGTTCCTTTAAGAGCAGACTTCCAGAGTCTTCTGTGTAGT
GGTCTGTAGAAAAAAAGCCATTGCTGAACTGATCCAAGTTCTCACTACCTTCTGTTTTTGACTCAGTTTCCTCTTCCACAGAGTCTAGCTCGGT
TTCTATCTCTGCAGATACCTCGCTTCTTTCGACCTTGTAGCTCTCCCACATCTTGAACTCAGTCTCCGCACCGTCTTTCTCTATTTTTCCTTCT
TCAACACTATGAGCTGTGGCTTCCATGGGACTTTCTTGTACCTTATGTTCTCTGCTTATGTCATGAAATACATCAGTCTCTCTCTTTTCATCCG
CACTCCCACAACCATTCACTTCAGAAAACTGAACCAAGTCATAATCGTTTCCGATGCTATTTCCAAGAACTGATATCTCTTTGGTAGGTGAAGC
TTCTTCCTCTAGCAGCTTTGATAACTCCTCCATTTTCTCAAGACTGGCAGCCTCCCTGCCCTTTAGCTCATCGTTATCCTGCATGGCTGTCTCC
AGCTCTGTCTTTTTGCCAAGTAAACTCTCTTTCAGCTTCGACAACTCCTCTATTTTCCTTGCTGCTAAAGCATCACGCGTTTTAAGCTCTTCGT
TTTCTTCAGTGACTCTTTGAAACTCGCTTTCTTTATCAAGCCAGCTTTGCTCAAGATGTAACAACTCATCAATCTTTATCAAAGAAGAAGCTTC
CTTGGCCTTGAGCTCCTCGTTTTCGTGTAAAACACCCTGGAACTCGTTCTGCTTGTCAAGCAAACTCTGTTTAAGTTTTGTCAACTCTTCAATC
CTCTCAAGGGACGAAGCTGCTCCTGCCTTGAGCTTCTCGCTTTCAACCATCGCAGCCTTCAGCTCCGTTTCTTTAACAAGCAAACTGTGATTAA
GATCTGATAACTCGTCTATTGTCTTGAGTGATGAAACCTCCTTGGACTTCAGCTCCACGTTTTCGCAAATGACAGCCTGTAGCTCGTTCTCTTT
CACGAGTAAGCTTTTATTGAATCTTGATAACTCTTCTATCCTCTTTTGGGATAGAGAGTCCTTGGATCTAAGATCCTCAATCTCCACGAGCATA
CCATTCAACTCATTTTCTTTATTAAGAAGATCCTCATGCACCTTTGACAACTCCTCAATCTTCTTGAGATAAGTAGTCTCCCTTTCTTTGAGCT
CCTCTTTTTCC |
Primers for UN11332 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAGCCATGTGAAAGCATCAA |
59.276 |
20 |
TCCGAAAATTTGGAAACCTG |
59.91 |
20 |
188 |
29 |
216 |
| 2 |
AGCCATGTGAAAGCATCAAA |
59.276 |
20 |
TCCGAAAATTTGGAAACCTG |
59.91 |
20 |
187 |
30 |
216 |
| 3 |
GCCATGTGAAAGCATCAAAC |
59.131 |
20 |
TCCGAAAATTTGGAAACCTG |
59.91 |
20 |
186 |
31 |
216 |
|
|
