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Simple sequence repeat (SSR)
>UN11334
AAGAGTCACAAAGATTAGCGCAGAAACAGCAACTTGAGAAGAAGAAGAAGAAGAAAAAACAATGATGCTTGCTCGATTTGCCTTTCGATCTCAA
CAGAGAGCTTCTTTCTCGGTTCGTCAGTCTGCGTATTACTCGTCTTCATCATCATCATCAGCAGCTTCAGCTGAAGCTGAAAGGACGATTCGGG
AAGGTCCGAGGAATGACTGGAGTAGAGATGAAATCAAGGCTGTTTATGATTCTCCTCTTCTTGACCTCCTCTTCCATGGCGCTCAGGTTCACAG
ACATGTTCATAACTTCAGGGAAGTGCAGCAGTGTACTCTTCTCTCCATAAAGACTGGTGGGTGCAGCGAGGACTGTTCCTATTGTCCTCAGTCC
TCCAGATATAGCACTGGAGTCAAGGCCCAAAAACTCATGTCCAAGGACGCCGTCATTGAAGCAGTAAAGAAGGCAAAAGAAGCTGGTAGCACAC
GTTTTTGCATGGGTGCTGCTTGGAGAGATACAATAGGACGGACAACCAATTTCAACCAGATACTTGATTACATCAAAGAGATAAGAGGCATGGG
GATGGAGGTTTGCTGCACATTGGGCATGATTGAGAAGCAACAAGCGTTAGAGCTAAAGAAGGCCGGCCTCACTGCTTATAACCACAATCTTGAT
ACTTCAAGAGAGTACTACCCTAACGTCATCACGACTAGAAGTTACGACGACCGACTTGAGACACTTGGCCATGTTCGTGAAGCTGGAATCATGT
CTGTTCAGGAGGAATCATAGGGCTTGGAGAGGCAGAGGAAGACAGAGTAGGATTATTACACACATTAGCAACACTTCCTTCTCACCCTGAGAGT
GTTCCTATCAATGCTCTGCTTGCAGTGAAAGGCACTCCTCTTGAAGACCAGAAGCCGGTTGAGATATGGGAGATGATCAGGATGATTGGAACAG
CAAGAATAGTGATGCCAAAAGCAATGGTGAGGCTATCTGCTGGCAGAGTCCGTTTCACCATGCCAGAGCAAGCCTTGTGTTTCCTTGCTGGTGC
AAACTCTATCTTCACTGGAGAGAAGCTGTTAACAACACCAAACAATGACTTTGACGCTGACCAGCTCATGTTCAAGACTTTAGGACTCACTCCT
AAACCCCCAAACTTCTCCGAAGATGATTCTGGATCAGAAAATTGCGAGAAAGTTGCTTCTGCTTCTCACTAAAGTCTGGACACTCTTTGAAGTA
GCCACCTTTTTACTATGTAGCATTACAGTATCAGTTTCAGCGATGCTAGCTCTACAGAATCTTAAGTTGATTATGATATAATAATGACCAGTAT
AAACTTGTCAC |
Primers for UN11334 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATTAGCGCAGAAACAGCAAC |
60.039 |
21 |
CGAATCGTCCTTTCAGCTTC |
59.955 |
20 |
174 |
13 |
186 |
2 |
GATTAGCGCAGAAACAGCAA |
59.21 |
20 |
CAGTCATTCCTCGGACCTTC |
59.655 |
20 |
195 |
13 |
207 |
3 |
GATTAGCGCAGAAACAGCAA |
59.21 |
20 |
CCATGGAAGAGGAGGTCAAG |
59.649 |
20 |
255 |
13 |
267 |
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