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Simple sequence repeat (SSR)
>UN11349
AGGCCTTTGCTCACGCGTATGAGTTGGCCGGAGAGTGTGCTGATGATGATGATGATAAGTTGGCGATTTCTAACTTGAGGAAAAGCGTCATGGA
TGATTTGAAAATGCACGACTCCTTTGTTCAGGATTGGGATTTAGACATTAACAAAGAAGTAAGTGTTAACTCAGCAACTTTGAGATACACCGAG
TTCTTATTAGCTACAGCATCCGGAAAAGTAGAAGGACTCAAAGCTCCCGGCATGCTTGATACTCCATTTGAGAAAACGAAAGTGGCCGCCTACA
CGCTTGGTGCTGTGACACCTTGCATGAAGTTGTATGCCTTTCTTGGTAAGGAGTTTGGAGCGCTTCTAGATTCGAGTGAAATGAACCATCCCTA
CAAGAAATGGATCGAAAATTATTCTAGTGAAGCTTTCCAGGCATCAGCTAAGCAAACTGAAGACTTGCTCGAGAAGCTTAGTGTCTGTATGACT
GGGGAAGAGCTGGACATCATTGAAAACTTGTATCAACAGGCAATGAAGCTTGAAGTAGAGTTCTTCCATGCCCAACCGTTAGCTCAGCCTACCA
TAGTTCCGCTGCTGAAGAACCATTCAAAAGATGATCTCATGATATTTTCTGATTTTGATCTGACTTGCACCGTTGTTGATTCTTCTGCTATTTT
AGCCGAAATTGCAATCGTAACTGCCCCGAAAGATGACCAGGGTCAACAAGTGAATCGGATGCTCTCGGCTGACCTGAAGCACACCTGGAGTCTA
CTTTCTAAACAGTATACAGAGCATTATGAAGAGTGCATAGAGAGTATTCTGAATAAGGAAAAAGCGGACAAGTTTGACTACGAGGGTTTATGTG
AAGCACTAGAGCAGCTGTCAGAGTTTGAGAAAAAGGCAAACGATCGAGTGATCGAGTCTGGTGTACTCAAGGGCCTGAATCTCGATGACATCAA
GCGAGTTGGGGAAAGGTTAATTCTTCAAGATGGCTGCATCAGTGTCTTCCAGAAAATTTTGAAGACTCAGGATGTGAATGCAAAACTCCACGTG
CTTTCGTATTGTTGGTGTGGTGACCTCATCAGAGCAGCCTTTTCTGCACGGGGAGTAGATGCAGTGGAAGTACATGCAAATGAATTCACGTTCG
AGGAATCTATCTCTACTGGAGAAATTGAACGAAAAGTGGAATCCCCAATCGACAAGGCTCAGCAGTTTAAGAGCATTCTAGAAAACAGAAAGAA
GGAGGATAAAGGCATCCTTACTGTTTACATTGGAGATTCAGTAGGTGACTTGCTCTGTCTCCTGGAAGCAGACATAGGAATAGTGGTTGCCTCT
AGCTCGAGCCTCAGGAGAGTGGGAAGCCATTTCGGGGTCTCATTTGTGCCTTTGTTCTCTGGAATTGTGCAAAAACAGAAACAAGAAGAAACCT
GGAAGGGACTTTCTGGCACACTTTACACGGTATCAAGCTGGGCTGAAATACATTCCTTCGCTCTTGGATGGGAGTAAACGGCAGAAGAAATATA
TGATTGAAGTTTGTATATACTGCCGGGGGTGGCTAGTTTTTATCAAGGGCCACGTATAAGTTTCAGTCTTTCCCTTTGAAAGTTGTGACATGAT
GAACTTTGGTAAGTCTCGTCTTAGAATCTATGAGCTTCTGTTGCTTTGTTGCAATGATCTCTTGGCTTTTGACAGAAAAGATGTGATGCAGAGA
TGTCATTTGATGATATGCATATACAATAAAACATTTATACATAATTCTTGAAGGGCAAAA |
Primers for UN11349 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTTGCTCACGCGTATGAGTT |
59.493 |
20 |
GGCCACTTTCGTTTTCTCAA |
60.227 |
20 |
270 |
6 |
275 |
| 2 |
TTTGCTCACGCGTATGAGTT |
59.493 |
20 |
TCCCAATCCTGAACAAAGGA |
60.43 |
20 |
128 |
6 |
133 |
| 3 |
TTTGCTCACGCGTATGAGTT |
59.493 |
20 |
CCCAATCCTGAACAAAGGAG |
59.521 |
20 |
127 |
6 |
132 |
|
|
