 |
Simple sequence repeat (SSR)
>UN11397
ACGGCACCCTACTTTTTTTTGTAACTTACGGCACCCTACTTCCATCTTCGTTTCTCTGAGTGACGGCGATGACGACTATCGATCTTCTTCGTTA
ATCCTGTAACGGATCGATTTATGATCTCTACTAATGGCTCTTCAATGCGAGCATCGAAAGAAGAAGAAATCTCACTAGATGAGAATCTTCCGTT
TTTTGTGGTTCCAGGGTTCAAGAGATTCGTGTATTGAGTGAAAAAAACAAAGACAAGTTTTGTGCTCTGTATTTTTGGAAATTTAGTTGATAAA
CCTCATCGCTATCAATGGAGAACGGAGGCTCCACCTCCTCCTCCTCGGGATCATCATCATCATCCCTTCAAGCCTCTATGCAATAATTTAAACT
CTTTGAAACTCAATCGAATTTCTATATGATTGGTTGGAATGGTAATAGAGTGTATAGAGTACTAAAGGTAGACCGTTTTGATGCATCTGAGATT
ACTCTGAGGATTCCACTGCTTATACCAAAAAAGAATGCTACGAGTTGCTTAAACGGATACACGAAGACAACAAGGCCACAGGCAGCCTCAAACT
GGTCACTCTCTGTTATGGCATCACTGGGTTCATTAAGTTTTGGGGACCATACTACATGTGGTCACAAGGTCTATGAAGTGTCCAAGATTGAGAT
CATTTCTTTGCGTAATTCTTGCGTGCTTTCCACCATTGCAAATTCAAGAGACGAGAACATGTGTTTTGTTCTACCTTTTACTATATTATGCCCT
TTTTTTTGTTCCGAGCTTATTGTTGAAGAAAGGTTCTGTTTTACCTTTTTGTTTGGTGACATGAGAGTACAAGAAGCTCCTGTGTATGGTGGAC
CTTACAAAGGATTTCTTTTTCAGCTATTATTTCAGTATAATGCGTAGTTTCCATAAAATTATATGTGACCATGAAAGTGGTGATATTCTCTATA
AGAAAATGTTTGTGTGGTACGAGTTCTTGACTCGGGGAATTCAACATCATGGACTGTAGCATTTGTGTATGGTTTCTCTAAGCATGTATGAATC
GGATATATATTTTTTGCTCCTCACTGCCAAAGAGAAGAAAGTTTTCCCGA |
Primers for UN11397 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TATCAATGGAGAACGGAGGC |
60.036 |
20 |
TCTCAGATGCATCAAAACGG |
59.799 |
20 |
177 |
292 |
468 |
| 2 |
TATCAATGGAGAACGGAGGC |
60.036 |
20 |
TCAGATGCATCAAAACGGTC |
59.654 |
20 |
175 |
292 |
466 |
| 3 |
TCCAGGGTTCAAGAGATTCG |
60.187 |
20 |
TCTCAGATGCATCAAAACGG |
59.799 |
20 |
271 |
198 |
468 |
|
|
