 |
Simple sequence repeat (SSR)
>UN11401
GGGATTTTGACGCAAAAAAAAGCGATGAGCTTAGCTTCAGTTATCCACCACCACGGAGTTCTCGCTCCGGCAAAACAGGATCGAATCTTTGTAA
GCGTTCCGGTGATTCCGCCGAACTTCCGAGTTCGTGGATGGACTGAGTCTCCTTTCTCTCTCGTTTCAGCTGCAAATCGTCGTCTTTCTCCTAT
TGCTTGCTCCCGAGGAACTGATCAGGAAGATGATCTTTCTTCTTCTTCTTCTTCTTCTTCAGAGAAGGAGAGCAGAGATCTTCTACCACATGAT
AAAGACCTGAGAGATACTACTCTACAAGATGAGTCTTACAAAACTTCCTTCAAGACTGTTGCCTTGTGTGTAAGCGCTGCGGTGGCATTTGGAA
TCGGAATAGGTTTGAAAGATGGTGTTGGCAAGGCATCTGAGTTTTTTGCTGGCTATTTATTGGAACAAAGCTTGTCAGTGGACAACTTGTTTGT
TTTTGTTCTCGTCTTCAAGTACTTCAAAGTGCCCCCTCATGTATCAGAATCGGGTGCTTTCCTATGGTGTAGCTGGTGCAGTTATCTTTCGCTT
CACCCTCATATTAATAGGAACAGCTACTCTTCAGAAATTTGAAGCAGTCAACCTACTGCTTGCAGCAGTTCTCTTATATTCGTCTTTCAAGTTG
TTTTCAAGTGAAGAAGATGATACAGATCTATCGGACAACTTCATTGTGAAGACATGCCAGAGATTTATTCCTGTCACATCATCTTACGATGGGA
ACCGGTTTTTCACAAAGCATGATGGCATTTGGAAAGCGACACCATTGCTTCTCACAGTAGTAGTGATCGAACTCAGTGACATAGCATTTGCTGT
TGACTCACTACCAGCTGTTTTTGGAGTCACAAGGGATCCTTTTATTGTCTTGACCTCTAATCTCTTTGCAATCCTAGGACTAAGGTCTCTCTAT
ACCCTGATTTCTGAAGGAATGGACGACCTGGAATACTTGCAGCCATCAATAGCAGTGGTTCTTGGGTTCATCGGATGCAAGATGATCCTCGATT
TCTTTGGCTTCCATGTATCAACCGAGGCATCACTTGGTATCGTGGCACTGTCTCTCAGCACCGGAGTTCTATTGAGCCTAACAAATAAATCCGG
CGACAGCTAACTAAGAACGTGGAACAGATTACAGATGTAGTCAATCAAAAAGTGCGTTAGAACAAAATGGCAATGTTCATTAAATCATTTCACA
GGTGTGTTACTTACTACTGTAGATATTATATATGACAGAGAAGGGGTTTGCTTTGTAAGACGTATTGTTCAACGATTTTATTTTTTTGATTGGT
CGTTCAGAGCTGC |
Primers for UN11401 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCTGCAAATCGTCGTCTTT |
60.022 |
20 |
TTGCCAACACCATCTTTCAA |
60.088 |
20 |
246 |
162 |
407 |
| 2 |
GCAAATCGTCGTCTTTCTCC |
59.82 |
20 |
TTGCCAACACCATCTTTCAA |
60.088 |
20 |
242 |
166 |
407 |
| 3 |
AGCTGCAAATCGTCGTCTTT |
60.022 |
20 |
AACTCAGATGCCTTGCCAAC |
60.263 |
20 |
258 |
162 |
419 |
|
|
