 |
Simple sequence repeat (SSR)
>UN11442
GAGTTCATGGTGTTCTCTCCCCATCCCAACGCTCCTCCTCCTCCGCCTTCTCCTCCTCCCATGCTTTCCTCTCCATCTCAGAGAGATGAGAGTG
ACACTGTCACAAACCTTCCTCACAATGCTTCTATAGGGGAGGGTTCTCTTCAGTCAAACATGCAGCCACCACCACAAGCTTCTTCTCATCCCCG
CCAGGTTTCTCCTTCAAACAGCAGGTCTCCTAATCAATCTTCCCCAAGTGATCAAGATAGAGCTGGACCATCCGAACTCCAATCATTTTCAGAA
TCTTTGAAGTCTCGTCTAACCTCCGTCTCGACGAGATACAAAGAATCGATAACAAAGAACACAAGTAACTGGAAAGATAGGTTTTTTTCTCGCA
ACACGTCCATGGCAGAACTTGGCTCTGAGGTTAAAAGAGAGGTCAGTGCTGGAATCGCTACTGTGTCCCGCATGATGGAACGTCTAGAAACGAG
AGAAAACACTAGTAGTAGTAGTAGTAGACCTGGCACTGCATCTGTATCATCATCATCAAATGGCTCAGAGAATCAGACTCCTGCTGAAACAAAC
AATGAGCGTAACAGATCAGAAGCAGGTGATGAACATTCTTCGAATGAAAGAGGTGTGAAAGGAACATGTGCGGCTGGTTCTAGTTCTAGCTAAT
AAAAACAAGTTCCAGCATCTTGTTGGCTAAGATATGGGAAGATGTTTTCTGTTGTGAAATTCTGCTATATATCTATAATATAATACCGAGTCGG
AAGTTCAAAAAGTGTTGGAGCAACATAGGAAGAGTTTCTGATTCTTGAAGAAAATAATAAGAAAGGTTATATGACCAAAAGGAGGCTTGCTTCA
GAGATGATACATACGCCTCCTTATGTGTTGTGCTATTTATGTCAAAACAAAAACTAAAATGAAAAAGAGTAAAGACTGTTGTTGTGCGTTGGTC
AGTGTGTTGTAAATTGACAGTTGTCGTTCACATTACTGTTCTCGACCAGTTCTA |
Primers for UN11442 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTCGTCTAACCTCCGTCTCG |
60.005 |
20 |
CGCTCATTGTTTGTTTCAGC |
59.469 |
20 |
280 |
293 |
572 |
| 2 |
CAGTGCTGGAATCGCTACTG |
59.615 |
20 |
CGCACATGTTCCTTTCACAC |
60.16 |
20 |
217 |
420 |
636 |
| 3 |
GCAGAACTTGGCTCTGAGGT |
59.604 |
20 |
CGCACATGTTCCTTTCACAC |
60.16 |
20 |
249 |
388 |
636 |
|
|
