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Simple sequence repeat (SSR)
>UN11473
CTCTAAACCTTTCACTACAGTTCTTATCTATTTTCCTTCAATGGCTACAGTCGCAGAGGCTGCTCCAGCTAAGAAATCGAGGAACAGCAGAAAA
GCATTGAAGCAGAAGAATGAGATCGCGGAGTCACCGTTGTTGTTATCATCGCCAGCAAAGGGGAAAGAAACGAAGAAGTCATACGAGAAAGACC
TGATGGAGATGCAGGCGATGTTGGAGAAAATGAAGATCGAGAAGGAGAAGACGGAGGATCTGCTGAAGGAGAAGGACGAGATCCTGAGGAAGAA
GGAGGAGGAACTCGAGACGAGGGACGTGGAACAGGAGAAGCTTAAGGTGGAGCTAAAGAAGCTTCGAAAGATGAAAGAGTTCAAGCCTACCATG
ACTTTTGCTTTCGGTCAATCTTTGGCACAAACTGAAGACGACAAGAAGGGGAAGAAGAAGAAGAAGAAGGAGTGTCCTGAGACGAAGAGACCTT
CCACGCCGTACATCTTGTGGTGCAAGGATAACTGGAACGAAGTGAAGAAGGAGAACCCAGACTCTGACTTCAAGGAGACTTCGAACATTCTCGG
TGCTAAGTGGAAGACTCTGAGTGCAGAAGAGAAGAAGCCTTACGAGGAGAAGTACAAGGCTGATAAGGAAGCTTACCTCCAGGTTATTACAAAG
GAGAAGCGAGAGAGGGAAGCCATGAAGCTACTTGAAGATGAGCAGAAGCAGAAGACTGCTATGGAGCTGCTTGATCAGTATCTCCACTTTGTTC
AAGAAGCTGAACAAGACAACAAGAAG |
Primers for UN11473 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTTGGCACAAACTGAAGACG |
59.881 |
20 |
CCCTCTCTCGCTTCTCCTTT |
60.088 |
20 |
278 |
397 |
674 |
2 |
TGGCACAAACTGAAGACGAC |
59.88 |
20 |
CCCTCTCTCGCTTCTCCTTT |
60.088 |
20 |
276 |
399 |
674 |
3 |
ACCATGACTTTTGCTTTCGG |
60.11 |
20 |
GCACCGAGAATGTTCGAAGT |
60.263 |
20 |
197 |
371 |
567 |
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