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Simple sequence repeat (SSR)
>UN11495
GGGCCCCACTCTTCTCTTCTCTTCTCTTGAGCTCCATCGAAACGGCAGCGGATTGTCTGCGATCGATCCCCGGAAACAAAGAAGAGAAGATGGC
GGCGCCGGAAGATCCAGTCAAGTACGTCGGAATCATAAAGGAATCCGCCGCTTTCCGCCTAATGAAATCGATGGGATGGGAAGAAGGAGAAGGA
CTTGGTAAAGACAAGCAAGGTATCAAAGGCTATGTCCGTGTCAAGAACAAGCAAGACACAACCGGTGTTGGTGTTGACAAGCCAAATCCATGGG
CATTTGATACTACTCAGTTTGATAACATTCTCAAGAAGTTGAAAGTGCAAGCAGCACCTATCAAGAAAGATAATGCTTCGGAGAAGGAAGCTGA
AAGTGAAGATGAAGCTGCCAAATCCGAGCCTGTCAAGCCCAATGTTGCTAAGGTTACTCGTCCACAAGGAAGGTATAAACGTAGAGAGAAGGGG
AAGCTTGTCAATTCTTACTCCTCTAAAGATCTTGAAGGCATACTTGTTAAGCGAACTGAGGAGCCTTCTCCTGCGGTTTGTGACATAGCCGATG
CTATGGAGATTGAAATCATATCTGAGGACCAACATCCTGATGTTAAAGAACAGAAAATCGAAGAACCTTCTTCAGACTGGTGGGGATTTAAATC
TGGGTTTGTCTCGGGCGGTCCTCTTGGAGCTAAGCCTGGCAAAAAGAAATTATCCAAGTCTAACGAGAGAAAAATGTTTTGTGAGGACGATCAA
GAGAATCTTTACAACATGGTTCAGGATAAAGCCACGGCTGGAAAACAAGGACTGGGTATCAAGGACCGGCCTAAGAAAATAGCTGGTGTTCGTT
ACCAAGGAAAGAAAACTTCTTTTGATAACAGTGATGATGATACTGATGACGAGGAAGAGGAAGAAGAAGAAGAAGAAGAGAGTGAAGAAGATGA
TGACAAGAACTCTGCTATAGAAAGTTCTCTCCCAGCAAAAAGGAAGCGTGATGAAATCACTGAACCTAAAATCAAGTTGAAGAAACTGTGCAAG
CAGATTCTTAAAAAGGAAGCTGGTAGTGGTGGAACCATGAAGCTGAAACAGCTTAAATCTCTAATTGATGAACAAGCACCATCGCTTCTCTCGG
AGTTTTCTTCAAGGAAAGAGGCTATTGCTTACTTGAAGCTTAAGCTGGAGCGAAGTGGGAAGTTTATTGTGGAGGGAAAGAAGATCAGTCTCGT
ATCTAAAAACAAGTGAGGACAATTATCGTTATACTACCTGCATAGGACAGTGGAGATTAGGGCAAGTTTTGTTACTGAATCATCACCATGCGGT
ATGCATAACAAATATCTTTCATTTTGAAATTTTGATGTGTTTGTAATTTTTTCATACAATTATAGTATGAGAGTCTGCTTTAAAACTTCACCAT
AGCAAGTCAAAACTAATCTCTTTTATTTAGGAGCAAATATAGAACAAACTCTTCTCT |
Primers for UN11495 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTGGTGTTCGTTACCAAGG |
60.55 |
20 |
TTCCTTTTTGCTGGGAGAGA |
59.926 |
20 |
152 |
834 |
985 |
| 2 |
GCTGGTGTTCGTTACCAAGG |
60.55 |
20 |
TCCTTTTTGCTGGGAGAGAA |
59.926 |
20 |
151 |
834 |
984 |
| 3 |
GCTGGTGTTCGTTACCAAGG |
60.55 |
20 |
TTCCACCACTACCAGCTTCC |
60.111 |
20 |
235 |
834 |
1068 |
|
|
