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Simple sequence repeat (SSR)
>UN11498
GGAAGAAGCAAACTAACAGTGAGCTAAAAAAAAGACGATGGCGGAGAGATCAGAGGAAGTGAAGCTACTGGGGATGTGGGCGAGTCCTTTCAGC
CGCCGTGTCGAGATAGCTCTCACCCTCAAAGGCGTACCATACGAGTTCTCTGAGCAAGATATCGTCAACAAGAGCCCTCTGCTACTCCAATCAA
ACCCGGTTCACAAGAAGATTCCGGTTCTTCTCCATAACGGTAAACCAATCTCAGAATCACTCGTGATCCTTGAGTACATCGATGATACATGGCA
GAACAATCCCATCCTGCCTCAAGGTCCGTACGACAGAGCTACGGCTCGGTTTTGGGGAAGATTCGTCGATGAACAGATCTATGTAACGGCGATG
AAAGTGGTGGGGAAGGTTGGAGAAGAAAAAGACGCGGCGGTGGAAGCGACTAGAGATTTATTGAAGTTGTTGGAGAAAGAGCTTGTTGGGAAAG
ATTTTCTCGGTGGGGAAAGGTTAGGGTTCGTGGACATAGTTGCAACGTTGGTGGCGTTTTGGCTGATGAGAACGGAAGAGGTGGTTGGAGTCAA
GGTTGTTCCTGTGGAGATGTTCCCAGAGATTCACAGATGGGTTAAGAATCTTTTGGACGTTGATGTCATCAAGAAATGTATCCCTCCTGAAGAT
GAACATCTCAACTACATTAGAGCTCGCATGGATCGCCTCAAACTCAAATCTGTTTGATAACCATATATATATATAAATTCAATAAATCAAATAA
ACTATTTGTTATTAGTTTGTATCTTGTTATATGTTGTTGAAATAACATTGCCAGTTCTTATGTTGTGTAAGAGTTTTTTTTTTTCGGTCACTTA
TATGTATATTTACTCTATTCAACTTGAACTGTTACAGG |
Primers for UN11498 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGAAGAGGTGGTTGGAGTCA |
60.088 |
20 |
CACAACATAAGAACTGGCAATG |
58.227 |
22 |
276 |
544 |
819 |
| 2 |
GGAAGAGGTGGTTGGAGTCA |
60.088 |
20 |
CACAACATAAGAACTGGCAATGT |
59.078 |
23 |
276 |
544 |
819 |
| 3 |
GGAAGAGGTGGTTGGAGTCA |
60.088 |
20 |
ACACAACATAAGAACTGGCAATG |
59.078 |
23 |
277 |
544 |
820 |
|
|
