 |
Simple sequence repeat (SSR)
>UN11509
GGACCGACGTGTGTGTCCGAGATTCACTTCCTCTCTCATCCTCTTCTGATCCCGCCGCCACAAAACCTCCTACCTCTCCGCCTATAGCTGTTAA
CTGTTATAAAGCCCGGTAACAAGCAGCTGAGGAATAAGAAGACGTCCTGATGATGATGATGACTTCACTCGGTATGGATGGTGGTGGTGGCGGT
GGTGGAGGAGGAGGGAGATTTATGACGTATCCGCCGCCTCTTTCCGTGCCTCCGTCGGCTCCTCAGTCACCTAACTTCTCTGGTGGTCTCCGAT
CACAACCTTCTTTCCTCGTTGAGCAAGAAAAGTATCTTTCTGAATTACTTGCAGAGCGCCACAAGCTTACTCCCTTCTTGCCTGTGCTCCCACA
TGTCTTCCGTCTGATGAATCAAGAGATCTCTTTCATCATCTCCAGCACCAAATTGGCTAAACTCTCCTGGTAGCTCGTCCGGTCTCATTGTAAA
ACGATCAATCAGGGTGGATATTCCAGTCGACAAGTATCCAAACTACAATTTCGTTGGCCGTCTCTTGGGACCTAGAGGAAACTCCCTAAAACGA
GTTGAAGCGAGCTCTGAATGCCGTGTTCTTATCAGGGGGAGAGGCAGCATTAAAGACCCAGTCAAGGAGGAAATGATGAGAGGGAAACCAGGGT
ATGAGCACCTGAATGAACAGCTCCACATCTTAGTGGAGGCAGAGTTGCCCATTGAGATAGTGGATGCACGTCTCATGCAAGTTCGTGAAATCCT
AGCCGATCTACTTACTCCAGTGGAGGAGACGCATGATTTCTACAAGAAACAACAGCTAAGGGAACTGGCGCTTCTCAACGGTAGTCTTAGAGAA
GAAGGTTCTCCATCTCCAATGTCTGGTTCCGTCTCTCCTTACAATAATAGCCTCGGAGGCATGAAGAGAGCCAAGACAAGGGACTAAACAAAAC
AAAACTCATCTCACCCTTTTTCAACAAAGGTATAATTATATATTGCAACGTAACCACACTTCCCTTCTTCAAACAAGAAGGCTTTTGAAGGTTC
CATCTCCATCCCCATCCCCACCTGGCTGCTACCGGTACCCTTCATATATGAGTCTGTGTCTGTTTACTTATGTGTCCCGGAGAGAGTTCAGATG
ACAGAACTACAGGAGTCTGTATCTTTGTGTATCTGTCTCCATCCGAGGGTTAGTTTTGGCTTTGCTTTTGTTCTTTTGGTTCAGTGGAGACTAG
TGATAAGCTTTGTTGCTTAATTTTGGGTAAAAACATATAATGTTTTGTGTTTTGGTAATGAATTATTCTGTTTGCATTAAAACATAAACACATC
AACTAGTATAAGTTTGTTACTACTACATTATGCAAACTCATCAAGCCTTGTCATTGTTATCGTCGTCATCATCATCATCATCTTCATTCTCATC
TATCCCAACCCACTGAGTTAATGCGAACAGGAACTCTTTAAAGTTCACCATTCCATTTCTGTCCCAGTCCATTTCCTCAAATCTCTTCATTGCA
ATCCTCCCGGAGGAACGTTCTCCAGATTCATCAATGGCTATGAACATCTCCTCGCGGCTCACATGTCCATCCTTGTTCTCGTCTAGGAACACGA
ACGTGCCCACTAGCGTCTCAAACGTCGGCTCCAGCTTCGGCATTCCCAGTCTCCATTTCTTTTGGAGAGTGGATGAGTCGTCCTTAAGAAGGTA
GACAAGGCAGAGAAGCACAATGAACTCAGTAAACGCAATCTCCTTATCCTCGTTGATATCACAAGCCTGGAACAAATCATTTATCTCTTCTTCT
TCAAACATGATCTCTAGCTTCCTGAAACAGTTCTTTAGCTCCGAGTGATCTATGGACCCGTTCGAATCCTCATCGAACTCTTGGAAAATGGCTT
TGCAGTTTCTTAGACCCTCGTCGATCTTTGGGAGCTTGAGGATAATACTGTTGAAAGATTTCATTGTGGTGCCTTTCGATGCCCTGCGTTGCAC
GGCTTCTTTGATCTTGGCCTCTAGCTTTGTCTCTGGTACCCATTCTTGAGCACCAGATTTCGTCACCGCACCTCCCATGTCTATCTATTATGCT
TCGATATCAAAATCTGTTTGTAGTTTCTTGTTTGTCACGAAATCAAGAACACGATTATAGAGATCTGTTTGTTGTTTATTGTTTTCTGTTTACC
AGGAGAAAGAAGATTCGATGTTTGAGAAGAAGAATTGATTTGTAATGCCGTGAAGAACGCTCC |
Primers for UN11509 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACGTGTGTGTCCGAGATTCA |
60.162 |
20 |
GTTAGGTGACTGAGGAGCCG |
59.867 |
20 |
257 |
7 |
263 |
| 2 |
ACGTGTGTGTCCGAGATTCA |
60.162 |
20 |
TCGGAGACCACCAGAGAAGT |
59.835 |
20 |
275 |
7 |
281 |
| 3 |
ACCTCCTACCTCTCCGCCTA |
60.225 |
20 |
GTTAGGTGACTGAGGAGCCG |
59.867 |
20 |
199 |
65 |
263 |
|
|
