 |
Simple sequence repeat (SSR)
>UN11509
GGACCGACGTGTGTGTCCGAGATTCACTTCCTCTCTCATCCTCTTCTGATCCCGCCGCCACAAAACCTCCTACCTCTCCGCCTATAGCTGTTAA
CTGTTATAAAGCCCGGTAACAAGCAGCTGAGGAATAAGAAGACGTCCTGATGATGATGATGACTTCACTCGGTATGGATGGTGGTGGTGGCGGT
GGTGGAGGAGGAGGGAGATTTATGACGTATCCGCCGCCTCTTTCCGTGCCTCCGTCGGCTCCTCAGTCACCTAACTTCTCTGGTGGTCTCCGAT
CACAACCTTCTTTCCTCGTTGAGCAAGAAAAGTATCTTTCTGAATTACTTGCAGAGCGCCACAAGCTTACTCCCTTCTTGCCTGTGCTCCCACA
TGTCTTCCGTCTGATGAATCAAGAGATCTCTTTCATCATCTCCAGCACCAAATTGGCTAAACTCTCCTGGTAGCTCGTCCGGTCTCATTGTAAA
ACGATCAATCAGGGTGGATATTCCAGTCGACAAGTATCCAAACTACAATTTCGTTGGCCGTCTCTTGGGACCTAGAGGAAACTCCCTAAAACGA
GTTGAAGCGAGCTCTGAATGCCGTGTTCTTATCAGGGGGAGAGGCAGCATTAAAGACCCAGTCAAGGAGGAAATGATGAGAGGGAAACCAGGGT
ATGAGCACCTGAATGAACAGCTCCACATCTTAGTGGAGGCAGAGTTGCCCATTGAGATAGTGGATGCACGTCTCATGCAAGTTCGTGAAATCCT
AGCCGATCTACTTACTCCAGTGGAGGAGACGCATGATTTCTACAAGAAACAACAGCTAAGGGAACTGGCGCTTCTCAACGGTAGTCTTAGAGAA
GAAGGTTCTCCATCTCCAATGTCTGGTTCCGTCTCTCCTTACAATAATAGCCTCGGAGGCATGAAGAGAGCCAAGACAAGGGACTAAACAAAAC
AAAACTCATCTCACCCTTTTTCAACAAAGGTATAATTATATATTGCAACGTAACCACACTTCCCTTCTTCAAACAAGAAGGCTTTTGAAGGTTC
CATCTCCATCCCCATCCCCACCTGGCTGCTACCGGTACCCTTCATATATGAGTCTGTGTCTGTTTACTTATGTGTCCCGGAGAGAGTTCAGATG
ACAGAACTACAGGAGTCTGTATCTTTGTGTATCTGTCTCCATCCGAGGGTTAGTTTTGGCTTTGCTTTTGTTCTTTTGGTTCAGTGGAGACTAG
TGATAAGCTTTGTTGCTTAATTTTGGGTAAAAACATATAATGTTTTGTGTTTTGGTAATGAATTATTCTGTTTGCATTAAAACATAAACACATC
AACTAGTATAAGTTTGTTACTACTACATTATGCAAACTCATCAAGCCTTGTCATTGTTATCGTCGTCATCATCATCATCATCTTCATTCTCATC
TATCCCAACCCACTGAGTTAATGCGAACAGGAACTCTTTAAAGTTCACCATTCCATTTCTGTCCCAGTCCATTTCCTCAAATCTCTTCATTGCA
ATCCTCCCGGAGGAACGTTCTCCAGATTCATCAATGGCTATGAACATCTCCTCGCGGCTCACATGTCCATCCTTGTTCTCGTCTAGGAACACGA
ACGTGCCCACTAGCGTCTCAAACGTCGGCTCCAGCTTCGGCATTCCCAGTCTCCATTTCTTTTGGAGAGTGGATGAGTCGTCCTTAAGAAGGTA
GACAAGGCAGAGAAGCACAATGAACTCAGTAAACGCAATCTCCTTATCCTCGTTGATATCACAAGCCTGGAACAAATCATTTATCTCTTCTTCT
TCAAACATGATCTCTAGCTTCCTGAAACAGTTCTTTAGCTCCGAGTGATCTATGGACCCGTTCGAATCCTCATCGAACTCTTGGAAAATGGCTT
TGCAGTTTCTTAGACCCTCGTCGATCTTTGGGAGCTTGAGGATAATACTGTTGAAAGATTTCATTGTGGTGCCTTTCGATGCCCTGCGTTGCAC
GGCTTCTTTGATCTTGGCCTCTAGCTTTGTCTCTGGTACCCATTCTTGAGCACCAGATTTCGTCACCGCACCTCCCATGTCTATCTATTATGCT
TCGATATCAAAATCTGTTTGTAGTTTCTTGTTTGTCACGAAATCAAGAACACGATTATAGAGATCTGTTTGTTGTTTATTGTTTTCTGTTTACC
AGGAGAAAGAAGATTCGATGTTTGAGAAGAAGAATTGATTTGTAATGCCGTGAAGAACGCTCC |
Primers for UN11509 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCAAACTCATCAAGCCTTGTC |
59.874 |
21 |
GGACTGGGACAGAAATGGAA |
59.903 |
20 |
133 |
1348 |
1480 |
| 2 |
GCAAACTCATCAAGCCTTGTC |
59.874 |
21 |
GGAAATGGACTGGGACAGAA |
59.903 |
20 |
139 |
1348 |
1486 |
| 3 |
GCAAACTCATCAAGCCTTGTC |
59.874 |
21 |
TTGAGGAAATGGACTGGGAC |
59.903 |
20 |
143 |
1348 |
1490 |
|
|
