Library    |     Search    |     Batch query    |     SNP    |     SSR  

Simple sequence repeat (SSR)

>UN11509
GGACCGACGTGTGTGTCCGAGATTCACTTCCTCTCTCATCCTCTTCTGATCCCGCCGCCACAAAACCTCCTACCTCTCCGCCTATAGCTGTTAA
CTGTTATAAAGCCCGGTAACAAGCAGCTGAGGAATAAGAAGACGTCCTGATGATGATGATGACTTCACTCGGTATGGATGGTGGTGGTGGCGGT
GGTGGAGGAGGAGGGAGATTTATGACGTATCCGCCGCCTCTTTCCGTGCCTCCGTCGGCTCCTCAGTCACCTAACTTCTCTGGTGGTCTCCGAT
CACAACCTTCTTTCCTCGTTGAGCAAGAAAAGTATCTTTCTGAATTACTTGCAGAGCGCCACAAGCTTACTCCCTTCTTGCCTGTGCTCCCACA
TGTCTTCCGTCTGATGAATCAAGAGATCTCTTTCATCATCTCCAGCACCAAATTGGCTAAACTCTCCTGGTAGCTCGTCCGGTCTCATTGTAAA
ACGATCAATCAGGGTGGATATTCCAGTCGACAAGTATCCAAACTACAATTTCGTTGGCCGTCTCTTGGGACCTAGAGGAAACTCCCTAAAACGA
GTTGAAGCGAGCTCTGAATGCCGTGTTCTTATCAGGGGGAGAGGCAGCATTAAAGACCCAGTCAAGGAGGAAATGATGAGAGGGAAACCAGGGT
ATGAGCACCTGAATGAACAGCTCCACATCTTAGTGGAGGCAGAGTTGCCCATTGAGATAGTGGATGCACGTCTCATGCAAGTTCGTGAAATCCT
AGCCGATCTACTTACTCCAGTGGAGGAGACGCATGATTTCTACAAGAAACAACAGCTAAGGGAACTGGCGCTTCTCAACGGTAGTCTTAGAGAA
GAAGGTTCTCCATCTCCAATGTCTGGTTCCGTCTCTCCTTACAATAATAGCCTCGGAGGCATGAAGAGAGCCAAGACAAGGGACTAAACAAAAC
AAAACTCATCTCACCCTTTTTCAACAAAGGTATAATTATATATTGCAACGTAACCACACTTCCCTTCTTCAAACAAGAAGGCTTTTGAAGGTTC
CATCTCCATCCCCATCCCCACCTGGCTGCTACCGGTACCCTTCATATATGAGTCTGTGTCTGTTTACTTATGTGTCCCGGAGAGAGTTCAGATG
ACAGAACTACAGGAGTCTGTATCTTTGTGTATCTGTCTCCATCCGAGGGTTAGTTTTGGCTTTGCTTTTGTTCTTTTGGTTCAGTGGAGACTAG
TGATAAGCTTTGTTGCTTAATTTTGGGTAAAAACATATAATGTTTTGTGTTTTGGTAATGAATTATTCTGTTTGCATTAAAACATAAACACATC
AACTAGTATAAGTTTGTTACTACTACATTATGCAAACTCATCAAGCCTTGTCATTGTTATCGTCGTCATCATCATCATCATCTTCATTCTCATC
TATCCCAACCCACTGAGTTAATGCGAACAGGAACTCTTTAAAGTTCACCATTCCATTTCTGTCCCAGTCCATTTCCTCAAATCTCTTCATTGCA
ATCCTCCCGGAGGAACGTTCTCCAGATTCATCAATGGCTATGAACATCTCCTCGCGGCTCACATGTCCATCCTTGTTCTCGTCTAGGAACACGA
ACGTGCCCACTAGCGTCTCAAACGTCGGCTCCAGCTTCGGCATTCCCAGTCTCCATTTCTTTTGGAGAGTGGATGAGTCGTCCTTAAGAAGGTA
GACAAGGCAGAGAAGCACAATGAACTCAGTAAACGCAATCTCCTTATCCTCGTTGATATCACAAGCCTGGAACAAATCATTTATCTCTTCTTCT
TCAAACATGATCTCTAGCTTCCTGAAACAGTTCTTTAGCTCCGAGTGATCTATGGACCCGTTCGAATCCTCATCGAACTCTTGGAAAATGGCTT
TGCAGTTTCTTAGACCCTCGTCGATCTTTGGGAGCTTGAGGATAATACTGTTGAAAGATTTCATTGTGGTGCCTTTCGATGCCCTGCGTTGCAC
GGCTTCTTTGATCTTGGCCTCTAGCTTTGTCTCTGGTACCCATTCTTGAGCACCAGATTTCGTCACCGCACCTCCCATGTCTATCTATTATGCT
TCGATATCAAAATCTGTTTGTAGTTTCTTGTTTGTCACGAAATCAAGAACACGATTATAGAGATCTGTTTGTTGTTTATTGTTTTCTGTTTACC
AGGAGAAAGAAGATTCGATGTTTGAGAAGAAGAATTGATTTGTAATGCCGTGAAGAACGCTCC

Primers for UN11509 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1 GCAAACTCATCAAGCCTTGTC 59.874 21 GGACTGGGACAGAAATGGAA 59.903 20 133 1348 1480
2 GCAAACTCATCAAGCCTTGTC 59.874 21 GGAAATGGACTGGGACAGAA 59.903 20 139 1348 1486
3 GCAAACTCATCAAGCCTTGTC 59.874 21 TTGAGGAAATGGACTGGGAC 59.903 20 143 1348 1490