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Simple sequence repeat (SSR)
>UN11589
GGAAAATGTGAACCACGAACGAGCGAGACACACACACACAGCTTTATAAAGAGAAGACAGAGAAACCAAAACAAAACACAAACTGTGAATTTAT
TTATTTTTAATTGAAAAAGAAATGGGAAGCGAAGGGACGACGATTGTGAGGAAGCCAAGGTTTCTGTGTCTACATGGATTCCGTACGAGCGGAG
AGATAATGAAGATACAGCTTCACAAGTGGCCTAAATCTGTTATTGACCGACTCGATCTCGTGTTCCTCGACGCGCCTTTTCCTTGTCAAGGCAA
ATCTGATGTCGAAGGCATCTTCGATCCTCCTTATTACGAGTGGTTCCAGTTTAACAAGGAATTTAACGAGTACACGAATTTCGAGAACTGTTTG
GAGTATTTAGAGGATAGTATGATCAAGCTTGGCCCCTTTGATGGTCTCATTGGCTTTTCTCAGGGTGCAATTTTGTCTGGAGGATTACCAGGAC
TGCAAGCTAGGGGAATTGCACTCCAGAAAGTACCAAAGATCAAGTTCATCATCATTATTGGAGGAGCTATGTTCAAATCCACCAAGGTCGCCAA
GGATGCGTATTCATCTACCATGGATACTCCCTCCCTCCACTTTTTAGGAGAGACTGATTTCTTGAAACCTTACGGAACTGAGCTGATAGACTTC
TTTCAAGAATCCGGTGGTAGTTAATCATCCTAAAGGCCATACAGTCCCAAGACTTGATGAGAAGAGCTTAGAGAAAGTTACTGCATTCATCGAC
ACCATTGAGCATCTGCTAATGGAGGAACTCAAGATTGGTGAAGAAGCCACTACTAATAAGCCAGAATAGAACAACCACCTTATAGTGGTAATGT
ATAAGACAAATAATTGTGAAATGGCTGTAAAATCAAATTCTTCATTACACACTCTTTTGCCTTTTACTACACAAGACAAATAATAAACGTTTCA
TTCTTTAATTAGC |
Primers for UN11589 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
AAAATGTGAACCACGAACGA |
59.024 |
20 |
CGCTTCCCATTTCTTTTTCA |
60.181 |
20 |
123 |
3 |
125 |
| 2 |
GAAAATGTGAACCACGAACG |
59.024 |
20 |
CGCTTCCCATTTCTTTTTCA |
60.181 |
20 |
124 |
2 |
125 |
| 3 |
AAAATGTGAACCACGAACGAG |
60.023 |
21 |
CGCTTCCCATTTCTTTTTCA |
60.181 |
20 |
123 |
3 |
125 |
|
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