 |
Simple sequence repeat (SSR)
>UN11621
TTTGAGATCAGTTTCATTTACTTTTGCAAGGAAAGCGGTTTTGAGTTTTGGGTTGTGGACATAATGGGAAAGCCTGCAAGGTGGTTAAAAAGTG
TATTACTTGGAAAGAAATCATCTAAATCTAGTGGTTCTAAAGACAAGGAGAGAGCTGTGAATGGAAAAGAGGTAGTGGTTGTTTCAAAGATTGA
AGAATCCGATGTGGTTTCGGATCTTCCATCCTTTGGAAATGCAACAGTTTCCACCAGTGCTGCGGTAGAGGCACAGAAGATAGAAGAACATGAG
GTGGTTTCAGACGACGAGATACAGATTCCTGAGAGCCGAGCTCAACCAACAGATTCTCCAACCGCGGCTTCTCTTATACCTGATGATTCTCTAT
CGGATTCAGACAAAATTCAGCAAGAGATTGCAGCAACAACTCTGCAGGCTGCCTTTAGAGGCTACTTGGCTCGACGTGCCTTCTGGGCATTAAA
AGGTATAATAAGGTTACAGGCGGTTATCCGCGGCCACATGGGTTAGAAGGCAAGCTGTTGCGACTCTGTGCTGTGTTATGGGGGATTGTCAGAT
TGCAAGCACTTGCTCGAGGAAGTGAGATCAGACGTTCTGACATTGGGTGTTGAAGTTCATAGGAGACGCCTGTTGAATCACCACCATTTGGAGA
ATAAACTCCCTGAAGACTCTGTTGTTGAAACACATACTTATCTTGGAATCAAGAAGCTAACTGCAAATGCTTTTGCTCAGAAGCTTCTAGCTTC
ATCACCAAACGTGATGCCTGTGCACTTAGACAATGGCTATTCCAATTCAATCTGGTTAGAGAACTGGTCAGCCTCTTGCTTCTGGAAACCAGTT
CCTCAACCGAAGAAAACATCGGTCAGGACAACCCCTCTGCTGCTGCTTCTGCACAGACGTCCTTTGAGTTTGAGAAACCAAAACGCAGCAGCTT
CCGCAAATTTTCAACAAGCCAATCTGTAGAACTACCACCACTAGAAGAGCCTCCTCAAGTTGATCTAGAGAAGGTGAAACGTGGCTTGAGGAAA
GTGCATAACCCTGTAGTTGAGAGCTCTATCCAACCTCAACCATCTCCAGAAAAGCTGGAGATTGAGAATCCAGCTCTAGCTTTAGAACAACCTG
TGAGTGTCTTTGCTGAAGAAGAAAAGGATGAAACGGCTGAGACTGTGGTGGAGATAGTACACACTCATGGACCACTGGAGACCAATGAAGCACC
TGATTCTCCATTGGTGATAGAGAGCCAAGAAAATGTAATGGCTGAGGAGAAGGAGGAGGATGTGAAAGAAGAGAGAACTCCCAAACAAAAGAAC
TCAGCTGGGAAGGAGAATAAAAAATCAAGGAAGAAGGATTCTCCGGTTACTACTACTACTACTACTACTACTACTACTACTCAAGCTGCTGAGT
GTCAAGAGAGTAGTGATGTGAATCAGAGTAGTACCCCGGGGCTACCAAGCTATATGCAAGCGACTAAATCCGCAAAAGCAAAGCTGAGACTACA
ACAAGGCTCTTCTTCTCCTAAGCAACAAGGGGCTGAGAAAGCCACTAGACGTTACTCACTGCCATCTTCAGGTAATAACGCAAGAGTCACTTCT
GATTCTCCTAAGACAACAAGAGTCTCAAACTCTGGTGGCAAAACCGGGAAGAAGACCGAGAAACCTTCGGCCCGAGAAGGCAATGGGAAGACAG
CTCAGGTAGAGTGGAAGAGATGATATTCATCTGGTATTCAAAGAGGTCTCTAATGTTTCCCACTCTACAGATATGTTACCATCTATCTATATAG
TTAGAGTATGTAATTTCTGTTTGTGTTTGTGTTGAGAATGTACATCATCGGTTTGTTTTTTGTGTGTGAGTGGCAAGTTTATTTTCTGTTTTCA
TGCTACATTCCTTCTGTTATTACCTTGAAAAATCAACTTTGGTTA |
Primers for UN11621 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCACCTGATTCTCCATTGGT |
59.934 |
20 |
TAGCCCCGGGGTACTACTCT |
59.976 |
20 |
237 |
1218 |
1454 |
| 2 |
CACTGGAGACCAATGAAGCA |
59.831 |
20 |
TAGCCCCGGGGTACTACTCT |
59.976 |
20 |
254 |
1201 |
1454 |
| 3 |
GCACCTGATTCTCCATTGGT |
59.934 |
20 |
TTTTGCGGATTTAGTCGCTT |
59.853 |
20 |
270 |
1218 |
1487 |
|
|
