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Simple sequence repeat (SSR)
>UN11635
GGACCACATCGATCACGAAATCTTGGGTCGTCTCCTGCCATTAAAAACATCTCGCCAGATACATAGATAGATAAACTCCGATCTCTCTCTCTCT
CTGCACGTCGACTTCTTGTGTTTTTTTTTCGTAAAGATGAAAGCTTTCTGCATATTCGTCGTCTCATTGCTTCTCACCGTTAATTCCAGGGGAG
AAGCTACCTCTTCTGTTTTCTTCATTGATGGATCCAACAACCAATTTCTTCGTCCACCATCAGCCGAGGCGCTTCACATGTCCCTCTCTGAGGT
ATCTGCATCAGTGTCTGCCTTGTTGGGTTTTGCACCTCCATCTACTTTGACTGCCCATGGCTCCTCCAAGCTGAACAAGATTCTAAAGCCTAAT
CCTTTTGAGAGGCCTCGTGCTGCTTTTGTTCTAGAAATTGCCGGAGCTCATGATGCGCTTGTGGAAACCTACACTAGTCATTCTTTCTTGGGCA
ATGCCATAAGAGGCAGTATCAGTTCTGATTCTTACAATGCTGATATTGAACTTCCAGAAAGTGGAGTTGCTGTTGTGTCTGTCAACGAACCCTC
ATCTGATGTGACTGACAAAGACATGAATGGGTTTGCATCTTGGTTGGGTGGGTCGTATGTTACTGGCTCTGCTGAACCATTGACTGGATTGCTG
AGTATCCCTCTGGCTGCTGGTGCTAATGTGGAGTTCCATTTGGAAAGGGAAGCAGAGAGGAAATTTGCATTGAACCTTTTTGATCTATATAATA
ATATCAGGGGAGTAGTCAACCTTCATGGGGATTTATCTCATGGTATTGAGAGACCTGCTGAACT |
Primers for UN11635 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGTCGTCTCCTGCCATTAAA |
60.074 |
20 |
CCCTGGAATTAACGGTGAGA |
59.926 |
20 |
160 |
26 |
185 |
2 |
ATCGATCACGAAATCTTGGG |
59.894 |
20 |
CCCTGGAATTAACGGTGAGA |
59.926 |
20 |
178 |
8 |
185 |
3 |
CACGAAATCTTGGGTCGTCT |
60.111 |
20 |
CCCTGGAATTAACGGTGAGA |
59.926 |
20 |
172 |
14 |
185 |
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