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Simple sequence repeat (SSR)
>UN11655
GGAAATCTTCCTTCTTCTTCTTCCTCTCTGAGCTAAATCTTGAATCTGCTTCAGCAGTCCACTCTCTTCCTCAATTCCAAAGCTTTTCGATTAG
CAGATGGCTTCGTATTACTCTGCGTTTTTCGGCAATGAAGAGCCGCACTTTTTGGAATCATGCTCTCTTTGCAGTAAACACCTTGGTCTTAACT
CCGACATCTTCATGTACAGAGGAGACACAGCGTTTTGTAGCATAGAGTGTAGAGAAGAACAGATTGAATCTGATGAAGCCAAGGAGAGAAGCTG
GAAACTTTCTGCTAGATCTCTCCGTAAAAAATCTTCTGAAGCTGCAAAAGATTCAGCCGCCGGAAAAACCGTTCGGACAGGAACACTCGTGGTC
GCCTAGTATAATATTTTTATTACATAAGAAAACCAAAGCATGTAGCTTTTGTGTATACCCTTTTTGTCTAAAAGCTATATATATATATATATCA
TTCACCCCTCTTTTAAGAAAAAAACATGCAAAATTTTGTTCTGTTTCTATCTATCTTGCTCTTGATCGGGGATCTGAGGAGTTGTAAGATCTTG
TTAAGTTGGAGTTCGGGAGAGTGAGAGGTATTGATCTCTTGGGGGTTTAATTTTTGATCGATGTTCCAATAAAAAAAA |
Primers for UN11655 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GTTCGGACAGGAACACTCGT |
60.159 |
20 |
TACAACTCCTCAGATCCCCG |
60.065 |
20 |
204 |
353 |
556 |
2 |
AACACTCGTGGTCGCCTAGT |
59.792 |
20 |
TACAACTCCTCAGATCCCCG |
60.065 |
20 |
193 |
364 |
556 |
3 |
GTTCGGACAGGAACACTCGT |
60.159 |
20 |
CCCCGATCAAGAGCAAGATA |
60.17 |
20 |
189 |
353 |
541 |
|
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