 |
Simple sequence repeat (SSR)
>UN11689
ATCAGTTAAATTTTTGTATAACAAAAGTATTTGACAAATGGACCAGCCTTTTTGTTTCAATACATAAAGAAAAAAAATGAGAGGGCCAATCAAA
ACCATTGTCGACCTCTTTATATAAGATTGAATTACAAAAGGGCAGAGCAGCAACCAACTGATTAATTGTGACAATATATTCCAATTATATATAT
AAGCTGCATCCATCCCCTACAAAAATTTATGCACCATTTATATAACCTTTTCTTCTCCAAACTAAAGCAAGGGATCGGTGCATAAACACAGCAA
AATGTATATTCTCTACCAGCACTTAATAATCCTGGTTTGGTTTATTGAATCTTTATATCTGAATGAGATCAAACTCTCTTCGGTATTGACAAGC
CCACACTACTGGGCTCCAGTCAAGTTTGCAGGCACTGCGTTCACCGCACTACGAGTCCTCCCTATTCTTGGCATTGAGAACATACTAAACAGGC
CCAAACTCGTGTTTCCCGTGGCTTCTCCAGAAGGTGTTCCATTAGAGCTTTCGTTTATATCCTTCAACCCAGACATAGACTGAGTGTGCTGAAG
TGGACCATTTGACTGTTGAGCTCCATTAGGGGTTGACGTCAACTGGGATTCACGGGGAGAAGCAGGAGGCAAAGACAGACTCCTTAACGATGGT
GTCACAGGAGCTGCCTCAAGGGCTGGTACAGACGAAGTCGATGGCAAAGCCTTATTGGACTCTTGAAGTCTTTTGTGCTCCCGACACTGAGCAT
GCAGAGCTCCAACTCCTTTAAGCGTGAGATCCTGATTTCCCTCAATGCGGTAGACTTTGCTTGCCAGAGTTTCAACAGCCTCGAAAACAGACCT
AACGTCATCTTTCATATTTGCTGTACCATCACGTAGTTCAGTCACCTCTCTTCCTGTTTCTTTAATAATTACTGTACTTTCATCCAGAGTACGA
TCCATCCTGTCAATTTCTGAACCTAACTCCCGTTTTGTACCCGAGAGGGATTCATAAAAACCATCGATCTGGCTGCCAACGTTATTACATGCAT
CAGATAAGCTGCGCCTTGTCGCAAACATAAAATCTGGAAGTTTCCAGCCCTTCCACCATACATATCCGTAGCCTATCACCCCAATAATAATGAT
CCAACCATACTTTTTACCACCTGATCCTCCTGTCGAAATTATGGTTATAGGTCTGTTTGAAGCCAGCAGCTGTAATTCATGCCTAAGACTGTTA
ACCTGGGCTGTAAGTGTATCATTGCGAGGCCTGCTGCCTGATTTGGCAGGTTCTTCTTGTTTCAGCTGCCTTAGTACAATCTTAAAAGCACCAG
AGACAAAATGGGATACATCAGGTAAGCTCCCTTCTTTAGCAAGCACTGACCCAACAAGACCTGCACCGATGAGGATTGTGAGCTTCCCGAGCGG
AAGAGCCATATATATATATATATATGATGTTGCCTAGAGACGTAAAAACTGTACCCTGCGAGCTTGTTACGGCTTTAAGGATTAAGGTGGCAGA
GGGAGAGGCATGAGAAGATCGAAGAGATAATTGGTAGAAAAGAGCTTAGGAGAGAGGTAGAATCGGCGAGAAAGATGTGCTCTTTACGACGACT
GCAGAGGGAGGC |
Primers for UN11689 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCACCAGAGACAAAATGGG |
60.111 |
20 |
ACAAGCTCGCAGGGTACAGT |
59.937 |
20 |
169 |
1309 |
1477 |
| 2 |
AGCACCAGAGACAAAATGGG |
60.111 |
20 |
CGATCTTCTCATGCCTCTCC |
59.91 |
20 |
217 |
1309 |
1525 |
| 3 |
CAAGCACTGACCCAACAAGA |
59.873 |
20 |
CGATCTTCTCATGCCTCTCC |
59.91 |
20 |
170 |
1356 |
1525 |
|
|
