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Simple sequence repeat (SSR)
>UN11735
CTCGCAGTTTAGGGACAGCAATCACTTGGCGTCATCACTTCAACAGCAGAATGAACACTTAGCAGCATGGCATCAAGGACAACAGTCCAGCTCG
CGTGTGGTTCCAGGAAGCGGATATTACAGCCTTCCTAGTCATCAGAATCAACAGCCTCCTGGTTTCCGTCAAGCACAACTACTGCAGCAGGCAT
TTCAACAACAACAACAACAGCATTTTGGAGGACATGGCTATGGGAGTCCTTACCATTCACAAGCACTAGATCATCTCCATCACCAACACCAACA
ACAACAAAACGCCAGAGATGCTTCTAAACGGACCCCCCACCAACAGTTATGGCCCAACAACTACTGATCAAGAATCAATCAGTCAAATCCTGTC
TTCATGCCTTGCTTTTTCTTTCTCCTTGCAATGGGGGATGATTCCGAGGTGTGGGTGTGTGTGTTTGTGTGTGTTTTGGATTGTTGTGGTTTGT
GGTAAGGTCTTATGAAGGGTTTAGGTGAGAGAGACCTTCAGTGGCTGGCTTGTTTAGATGCTAACCAACCTTCTTGTATCACTAGAAACTCTGT
TTTTTCCTTACCAATTAACTCATGACTCATCAGTCTTGACTTCCTTTT |
Primers for UN11735 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGAACACTTAGCAGCATGGC |
60.019 |
20 |
GCGTTTTGTTGTTGTTGGTG |
60.05 |
20 |
243 |
52 |
294 |
| 2 |
GAACACTTAGCAGCATGGCA |
60.019 |
20 |
GCGTTTTGTTGTTGTTGGTG |
60.05 |
20 |
242 |
53 |
294 |
| 3 |
TGAACACTTAGCAGCATGGC |
60.019 |
20 |
AAGCATCTCTGGCGTTTTGT |
59.882 |
20 |
254 |
52 |
305 |
|
|
