 |
Simple sequence repeat (SSR)
>UN01186
GGAATCTCTCTCGTGTCGTGTCGTCTCTGTTTGTCTGAAATATCAACAAAAAAAAAATCACATTTCGTTACATTAAACGCTTCTCCTCCTCCTT
CCTTAACAACAAAGTCAACACCTAATCGAACTCTAATGGGAAAGCCAACGGTTAAGAAGACGCACAAGGATGCTTCCACCGGCGGCGACAAGTC
AGGTGCTAAAACCAACCACCGCTCTGCTTCAAGAGCCTTGGACGAAGACATGGAGATTTTCATCAGCAGAGCATCCGAGCTCAAAGAAGAAGGC
AACAAGCTGCTCCAGAAACGCGACAACGAAGGAGCGATGCTCTGCTACGACAAAGCCGTGAAGCTTCTCCCCAAGGACCACATCGACGTGGCTT
ATCTGAGAACCAGCATGGCCTCTTGCTATATGCAGATGGGACTAGGCGAGTATCCAAACGCGATTAGCAAATGCAATCGGGCTCTCGAGGCTTC
TCCTAGGTACAGCAAGGCTCTGCTGAGACGTGCCAAGTGTTACGAGGCTTTGAACAAGCTGGATTACGCGTTTAGGGATGCTAGGATCGTGCTG
AACATGGAGCCTGAGAACGCGGCTGCGAAGGAGGTGTTTGAGAGGGTGAAGAAGGAGCTTGTGGAGAGAGGTGTCGATGTGGGGGAGATGGAGA
AGAGCTTTGTGGATGTGCAGCCTCTTGGAGCTGCTCGGTTGAAGAAGGTTGTGAAGAAGAGTAAGAAGAAGAAAAAGGAAGATGAGGTTAAGAG
CCACAGAGCTGTTGTTGTTGTTGAGAATCCCAAGGTGAGTAAAGATAAGCCAAAAGAGGAAAAGAGTGATAATAATAATAATAATAAGTCTGAG
ATTGATGGAAAGAAAATCACTTTCAAGAAACAGAAAAAGAAGAGTGGTAATAAGGCTAAGGCAGGAGGAGAAGAGAGGAAGATTATGGAAGATG
ATAAGGTTGTTGTCATGGACAAAGAGGTGATTGCCTCGGAGATTGTTGAAAAGGAGAAAGAAGAGACAACGATTACTAGAACGGTTAAGTTGGT
ACATGGAGATGACATAAGGTGGGCGCAACTCCCCCTGGATTCTAGTATTAGACTTGTGAGAGATGTAATAAGGGATCGCTTTCCTGCTCTAAAG
GGGTTCCTGATTAAGTATAAGGACGCAGAAGGTGATTTGGTTACCATCACCACATCAGATGAGCTGAAGCTTGCTGCTTCTAATCATGATAAGC
TTGCTTCCCTTAGTTATACATAGCAGAGTTAACCCTGAGCAGAACCGACCTATGATGGTGAAAAGCTGTGAAGAGATTGAGCAGTGTTGCAGAT
AGTGGAGAGT |
Primers for UN01186 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAGCTGCTCGGTTGAAGAAG |
60.277 |
20 |
CCTCTCTTCTCCTCCTGCCT |
60.088 |
20 |
239 |
686 |
924 |
| 2 |
CTGCTCGGTTGAAGAAGGTT |
59.473 |
20 |
CCTCTCTTCTCCTCCTGCCT |
60.088 |
20 |
236 |
689 |
924 |
| 3 |
GAGCTGCTCGGTTGAAGAAG |
60.277 |
20 |
TCTCCTCCTGCCTTAGCCTT |
60.476 |
20 |
232 |
686 |
917 |
|
|
