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Simple sequence repeat (SSR)
>UN11899
GGAGTTCAGAACAAAGTAAACGAAAATCGAAAACGCCAAACAAGGCTATTCTCTGTCGTCGCCGAACACCTTCTCCTGCGTAGTCACCGGAGAA
ACTCCTGTCGACGGGTTTAAGAAGAAGAAGAAGATGGATATAATATCACAGTTGCAAGAACAAGTGAATTCCATAGCTGCAATCACTTTCAATG
CTTTTGGGACTCTGCAAAGAGATGCACCTCCGGTTCAGCTTTCTCCTAATTACCCTGAACCACCAACCGCTGCTGCAGCTGCTGCCGCTGCTAC
TGCTGCTACAGCTACTACGGCGGCTACTGATGCAGATCCTACCGCCGCTTTTCCTGAGCAGCCTAAGCAGCTCAGTGCCGATTTAGTCAGGGCT
GCTAAACAGTTTGATGCTTTGGTTGCGGCACTTCCTTTATCAGAAGGAGGTGAAGAAGCTCAGCTCAAAAGAATCGCTGAACTCCAGGTGGAAA
ACGATGTTGTTGGCCAAGAACTCCAAAAGCAACTAGAGGCTGCAGAGAAGGAGCTGAAGCAAGTTCAAGAGCTATTTGGACAAGCAGCAGACAA
TTGCCTTAACATGAAGAAACCAGAGTGAAAATGATTAATCTTGTGTATCAAACTGAATCAGAAACTAATATAATTTGGTTCAGCAACAATTATG
TTTTAGTTCCAGAAGTAATAGAAGTTGTGATTTGGTTC |
Primers for UN11899 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AATCGAAAACGCCAAACAAG |
60.11 |
20 |
CTTTGCAGAGTCCCAAAAGC |
59.993 |
20 |
183 |
25 |
207 |
2 |
CCTTCTCCTGCGTAGTCACC |
59.867 |
20 |
CTTTGCAGAGTCCCAAAAGC |
59.993 |
20 |
139 |
69 |
207 |
3 |
AATCGAAAACGCCAAACAAG |
60.11 |
20 |
GCATCTCTTTGCAGAGTCCC |
59.957 |
20 |
189 |
25 |
213 |
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