 |
Simple sequence repeat (SSR)
>UN11938
GCGAGACGCTGTACTAATCTTAGATCTATCTCTTTAAGGAGCTGCCCTCGCATTGGAGATCGAGGAGTTGCTTTCCTCTTGGCTCAAGCTGGTT
CTTACTTGACTAAAGTGAAGCTCCAGATGCAGAACGTTACGGGTTTGTCTCTTGCTGTTCTTGGACACTACGGAGCAGGGGTTACTGATCTTGT
GCTATGGGCTTCAAGGAGTGAATGAGAAAGGCTTCTGGGTCATGGGGAATGCAAAAGGGATGAAGAAGCTGAAGTCTGTTTCAGTAACGTCGTG
TAGAGGGATGACTGATGTTGGGCTTGAAGCTGTTGGAAGTGGTTGTACCGATCTGAAGCATGTCTCTCTGAGCAAATGCTTGCTTGTTTCCGGC
AAAGGGCTTGTCTCTTTGGCGAAATCTGCGTTGTTGTTAGAGAGTTTGAAGCTTGAGGAGTGCCACAGGATCAGCCACTTCGGTTCTTTAGGTT
TCCTCGTGAACTGCGGCTCGAAGTTGAAGGCTTTCTCTTTGGTTAACTGTCTTGGCATCCAGGACTTCAACTTGGAATCACATCTGAGTTCAAC
CAGCTGCAGCTCTATACGGTCTTTAACAGTCCGTTGCTGTCCTGGTTTTGGAGATGCGAGTCTCTCTTTCTTAGGGAAGGTCTGCCATCAGCTT
CAGGACGTTGAGCTTTGTGGATTGAATGGAGTGACTGACGCTGTTGTCCACTCTTTGCTTCAGAGCTGCAACAGTGTTGGTCTAGTGAAGGTGA
ACTTAAGCGGATGTGTCAATGTCACAGACAACACAGTCTCGGCGTTATCCTTCCGCCACGGAAGCACATTGGAGTCTCTCAACCTCGATGGGTG
CAAGAACATCACTGATGCAAGCCTTGTCACAGTAGCCAAGAACTGCTACTCGGTGAATGACCTAGACGTGTCGAACACTTTGGTATCTGATCAT
GGGATCCAGGCTTTGGCATCTTCTCCCAACCACTTGAATCTTCAGGTTCTTTCTGTCGGTGGCTGTTCAGGGATCACGGATAAAAGCAAGGCGT
GTATACAGAAACTCGGCCGCACGCTTTTGGGGTTGAACATCCAAAGGTGTGGTAAGATCAGCAGCAGCACTGTGGATACTCTTCTGGAACAGTT
ATGGAGGTGTGATATACTTTACTAGATACCTTTCTGCAAGTAGTTTTCTAGGGTTCTGGTCGCTAAACCCCCATAGATTTCACCTAGAACTTAG
TTTCTTTTCCCAGGACGCAGCAGCTGTTTTTTTTTTGCAAAGTTTTTGGCAGGTTCTTGAGCCTGTTTCCACAGCTGTTGTGTTCATGGGAATC
TTGTTACTGAGTTCTGGTAATCTAGTTAGGGTTTAAGCTTTGGAGTTGTTGTTGTTGTTGTTGTATATCTATGTTCTTTGTGGGAGTCATTGTT
CACTGGTTTAGGTGTGTGATAGTGCCTTTATCTTTCCCTATGTAGAGCTTTTGGCAATGGCGGTGTATCTTCTTAGTCGCCATTACATCTCTTA
GGAGTTGTTTTTTCTTTTGTGTTCTGCCAAAGCT |
Primers for UN11938 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGTTCTTGAGCCTGTTTCCA |
60.232 |
20 |
GCCATTGCCAAAAGCTCTAC |
59.851 |
20 |
198 |
1274 |
1471 |
| 2 |
TTTTTGGCAGGTTCTTGAGC |
60.365 |
20 |
GCCATTGCCAAAAGCTCTAC |
59.851 |
20 |
207 |
1265 |
1471 |
| 3 |
GCAGGTTCTTGAGCCTGTTT |
59.478 |
20 |
GCCATTGCCAAAAGCTCTAC |
59.851 |
20 |
201 |
1271 |
1471 |
|
|
