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Simple sequence repeat (SSR)
>UN11949
GGGGACCTTTCTTATTTCTAAACCACGTCCTCATCCGTCGGTCGACACAAACCGATCGTTTACGTCTCTCTCTCTCTCTCTCGGGAGCTCCTCA
CCTGCCGTATCGGCGAAATCTACGCTTCGTTCTCACCTGTAGATCGATCCAGCTACGATATCAGCCATGAATCCTGAATATGACTATCTCTTCA
AGCTTTTGCTTATTGGTGATTCCGGTGTTGGAAAGTCCTGCTTGCTTCTTAGGTTTGCTGATGATTCCTACCTGGATAGCTACATCAGTACCAT
TGGTGTTGACTTTAAAATCCGCACAGTCGAACAAGATGGAAAGACAATCAAACTCCAGATTTGGGACACAGCAGGTCAAGAACGTTTCAGAACC
ATCACTAGCAGTTACTACAGAGGAGCTCATGGAATCATTGTGACTTACGATGTAACGGACCAAGAAAGCTTCAACAATGTCAAGCAATGGCTAA
ATGAAATCGACCGCTACGCCAGTGAGAATGTGAACAAGCTACTGGTTGGGAACAAGTCTGATCTCACTTCACAGAAAGTTGTATCCACTGAGAC
AGCCAAGGCTTTCGCCGATGAACTTGGAATCCCTTTCTTGGAAACAAGTGCCAAGAATGCTACAAATGTTGAAGAAGCTTTCATGGCCATGACT
TCTGCAATCAAGACAAGAATGGCGAGCCAACCTGCTGGTGGATTTAAGCCTTCAACAGTCCAGATCCGAGGACAACCTGTAAACCAGCAATCAA
GCTGCTGCTCTTCTTAATGCGTTTTGTGAACACTTTTAACCATCTCATTTGTTTCCATGTACTACACCTGAACAACGTTGTTTCTTCATCTTTT
GTACTTGTTTGTTCAGTCACTTTTATTTCCAAAAGCTTTTGTATTAATGTACGTGGAAACACTAAGCTCGGTTGTAAAAGTTTTTCGTGCAAAT
CATTGCTAAGTGGTGTGTTTTCTTCCTGAAAGCCTTAATAAAAATTAAAAAGCTAAAAAGGTTACAGC |
Primers for UN11949 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TAAACCACGTCCTCATCCGT |
60.375 |
20 |
AAGCAAGCAGGACTTTCCAA |
59.993 |
20 |
217 |
19 |
235 |
| 2 |
CTAAACCACGTCCTCATCCG |
60.508 |
20 |
AAGCAAGCAGGACTTTCCAA |
59.993 |
20 |
218 |
18 |
235 |
| 3 |
TAAACCACGTCCTCATCCGT |
60.375 |
20 |
ACCGGAATCACCAATAAGCA |
60.331 |
20 |
196 |
19 |
214 |
|
|
