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Simple sequence repeat (SSR)
>UN11951
GCCTGAAACATGTCAAGACACAAAGTTCAGATGGGTTTAGGTATCATTGGAGGTTTAATGAATCTAATTGCTGGATCTTAAATCTATATCGGTA
TTGGTAAAAAATGTATTTGATCAGACAATACCTCTGAGCTTGAAGTTTCTTCGTCTGTAAGTATTATACATGTGTTTGACTTCCCAGAAAGTCG
AAGCTTCTCCTGCAAAGGTCCGGGGACAAGATGAAAACAGTTGAGAGGTGATAATGGCAGTAGATAATTGCAAGGGAGCTAAGTGAATGTTCAA
TTCATATGTTTCTACTCTTCACCAAAGAATAATACTTACCTGCATCATAATATCAGGCATCTTGTGATTTTCTCCTCCCATAGAGTCGCACAGA
TGCATTAAACCCATATTCGCAATATCCTGCTCCCATGAAGAAGGACAAAAACAGCAGCAAAATAAGTAAACTAGCTCCACAGTGATCCTTACAA
ATGGCATTTGAGTTAATAATATTCAGAACATTTATAAGGAGCAAGAATGGACCTGCTTGTACTCAATACTATCTAATGTTCCACCCTGAAAGAA
ACGGGAATAGGATGGAATCAGTGCACTATTACACCAGTAAGGTTTATTATAAGTAAATAAGAAAGAAAGAAAGAAAGAGTCTCATTGGTGGGTG
GGTCACGTACCATACCACCAAACATGTTATGCATTGCATAAAAATCATCTCCAATCTTAGCCATATCCTCTAGAGTCAAACCCACCTGTTTCCA
TTAAACTTATCAATACCACAGTAGAAAATAGATCAGTTTTTTGAAACTAGTTTATATGATCACAATAAAATTCGTACATCGTCCTGGAGTCCCT
TTAAGAGATCCTTCTGCGATTCCAGCTTATCGTCCGTCTTCTTAAGCCTCTCGGACAAGTGCTTCTTAGCATTCTGACCC |
Primers for UN11951 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACCCTGAAAGAAACGGGAAT |
59.805 |
20 |
GTATGGTACGTGACCCACCC |
59.973 |
20 |
121 |
553 |
673 |
2 |
GCTCCCATGAAGAAGGACAA |
60.195 |
20 |
GTATGGTACGTGACCCACCC |
59.973 |
20 |
269 |
405 |
673 |
3 |
CTGCTCCCATGAAGAAGGAC |
59.803 |
20 |
GTATGGTACGTGACCCACCC |
59.973 |
20 |
271 |
403 |
673 |
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