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Simple sequence repeat (SSR)
>UN11961
AAAAAGAACATGGTGGAGTCGTCCGTTTTTAAGAAGACCAACTTCTCTCCGTCTTCACAAGACATAAGAACAAGAACAAAGCCCCCTTATTGAC
TCACCATACTTCTTAGAATCAGGAAAAGTGAAGAAGCGAAAGAGAGAAGAAGAAGAAAGTCGGATGGGAGTGGATTACTACAACGTCCTCCAAG
TCGATCGCAACGCCTCAGACGATGATCTTAAGAAAGCTTACAGAAAACTCGCCATGAAATGGCATCCCGACAAGAACCCCAACAACAAAAAGGA
CGCGGAAGCCAAGTTCAAGCAGATCTCCGAAGCTTACGAGGTTCTTAGTGATCCCCAGAAGAAAGCTGTGTACGATCAGTATGGCGAGGAAGGC
TTGAAAGGGAACGTCCCTCCTCCAGATGCTGGTGGAGCCACTTACTTCTCTACCGGAGACGGTCCAACTTCCTTCCGGTTCAACCCGAGAAGCG
CAGACGATGTATTTGCCGAGTTCTTTGGGTTCTCCGGGCCGTTTGGTGGTGGTGGCGGTGGTGGTACAAGATTCTCTAGAAGCATGTTTGGAGA
TAACATCTTTGCCTCTTTCGGTGAAGGAGGAGGAGGAGGAGGAGCTATGCATCATAGTGTACCCAAGAAGGCGCCTCCTATCGAAAACAAGCTG
CCTTGTAGCCTTGAAGATCTCTACAAAGGTACCACCAATAAGATGAAGATCTCTAGAGAGATCGCTGATGTCAGCGGGAAGACGATGCCTGTGG
AAGAGATTTTAACGATTGATGTGAAGCCAGGGTGGAAGAAAGGCACAAGAATCACATTCCCTGAGAAAGGAAACGAGCAACCCGGTGTCACTCC
AGCTGATTTAGTCTTCATCATCGACGAGAAGCCTCACCCGGTCTTCACTCGGGAGGGCAATGATTTCGTAGTCACACAGAAGGTCTCGCTTGTT
GAGGCCTTGACAGGCTGCACTGTGAACCTGATAACACTTGATGGCCGGAGACTAACAATCCCAGTCACCAGTGTGATCCACCCCGAGTACGAGG
AAGTGATTCCAAAGGAAGGAATGCCCTTGCAGAAAGATCAGACAAAGAGAGGAAACTTGAGGATCAAGTTCAACATCAAGTTCCCCACGAGATT
AACCTTAGAGCAGAAGACAGGAGTGAAGAAGCTTTTCGGATAAATTGAACTATAATCACTACGTACCAGTCAAAGCAATGTACAACAAGTCAAC
AACAGAGGAGGAGGAAGATTTAAGCTTCTGTCTTGTGTCGATCAGAGAGATTGTGATTATTACTGTTGTATCCTTTTTGGTCGATCTGTAATAA
AATACTCGTAATAAAATTTGTTTGCTGTAATCC |
Primers for UN11961 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TATTTGCCGAGTTCTTTGGG |
60.067 |
20 |
TCAAGGCTACAAGGCAGCTT |
60.154 |
20 |
193 |
480 |
672 |
2 |
TATTTGCCGAGTTCTTTGGG |
60.067 |
20 |
CTTCAAGGCTACAAGGCAGC |
60.154 |
20 |
195 |
480 |
674 |
3 |
TATTTGCCGAGTTCTTTGGG |
60.067 |
20 |
GGCAGCTTGTTTTCGATAGG |
59.845 |
20 |
181 |
480 |
660 |
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