 |
Simple sequence repeat (SSR)
>UN12001
GGGCTTCAAGAACCTTCCATTACACAGAAAAGGTACAAGTATCACAGGAACAAACTAAATATAACTAACCTTGGTGTTGTGTGTTCCAATTAGT
TACATGCACATATAAAATCCATATCCCACAAAAATATAACTCACAAATATAACAGAAGAAGAGATTTCATCACAAACTTACAAGGACTCGTTAG
TAAAAGGGATCTCTTGGAACTTGAAAGAAGCATTGCCCGCGTTCTCGCGTAACACATTCTCGTCATCCGCCAATGGCATCACTTGTCTGTCACC
GACCTGTCGCGGTGGCAATGCCTCTCGAACCCCTGAAAACTCCATCGAATCTAGCGTTTCGTTACTAAACAACAAGTGGCTGCTGCTGCTCCTG
GGCGGTGAGGAGAATGCAGCGGTAGCGGAGGAATCCCACAGAATGACGTGGAGGACGATGGAAACCTTTGCGTGACGGTGAAGCGATAGTTTCT
GGCTGAGCGAAACGGTGTCGTAGCAGCGAATGGCTCCGGTTGAGGAAACCATCCATGGCAATACCTTCTGGCTACCAACACGTGAAACCACCAG
ACGACGCGAAGCTTTGGCTGCTTCTCTGTATAATGAGCTCAGGCCTGATCTTGCAGCTGGTGCACTCTCGTCATCGTGGTCCGTCACTGAAGAG
ACATAAATGAAACCCTCTTCAGTGCGGCTGATGGAGAACCCTAGTTTGGTGTCATCATCTCTGAGTTTGATTTCTAGTGGCAACTCAACGCCAA
GAGGAGCATACCAAAGCCGAACCGCTCTGACCACACCAATATCAACTCCATGATAATCCTCAAACCCATAGAGACTCGCGTTTGCAAGATTCGA
TAGGTCAGAAAGTGAAGTCGTATTAACTGTAGCTGAGGCAGTTTCTCCCGATATCTTGGTAAGCAAAGATTCAGTCTGAATATTCATGAAGACG
ATAGGAACGCCATTGGCTTGTGAACAGCTTAGCCAAGCATTTGCACGAGCAAGTGTGTCTTCCAAGTCGTTATACCGAGAACCAGCCCTTCCAT
AAGCAGAAGCTTTGGGAAGAAACAGAATGGAGAGGAAGTTGCTTGAGCCGGAGATTGGTAAGGCTTCTTGCATTCTTCTTTCCCATGGATATGA
AACGTAACCATCTTGAAGCTTTACCCTCACCAATGCTTCCACCATTCTTGATCCTCTTGATGCTTGTATACCGAGGCAATCCGACTCAGTCCGA
TCCGAGAACCCGACTGTATAATTCGGGTCATCAATGGATCTAAGCATGTACTGTTTTTTACCGGCGGAATCGTTAGGAACAATACAAGCAGACA
GATCGGATAAATCGTGGGAGCCACGTCTGACTCTGACAACAATCGAAGTATCTTTGTTCCTGTAAGAATTGTGTAAAACCTTCTGTAACCAAGC
TTTACCTCCTTTAAACGGAGCCTTGAAAATAGCCGAACCGGGTCCTGAACCGATCCGAATTTCTTCGACTATGTCCCCGGTCTGAAGCATATCG
CCGCTCCATTCGTCGCTGTTGGAGCTTCCTTTGAGACAGTCGATGGAGAGGACGACGGTGTTTCCGGGTCGGGTTGTGGTTTCGGGTTGGTGGG
TGCGATCCATTGGCGATGTTCTCGGGTTTGCACGAGAGAGAGAGAGAGACACAGAGACAAAGTAAGAGAAAGAAAAGAGCTTCGAAAATGTGTT
TCC |
Primers for UN12001 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTTCTTCGACTATGTCCCCG |
60.066 |
20 |
GGAAACACATTTTCGAAGCTC |
58.825 |
21 |
226 |
1470 |
1695 |
| 2 |
GACTATGTCCCCGGTCTGAA |
59.927 |
20 |
GGAAACACATTTTCGAAGCTC |
58.825 |
21 |
219 |
1477 |
1695 |
| 3 |
TGAACCGATCCGAATTTCTT |
59.505 |
20 |
GGAAACACATTTTCGAAGCTC |
58.825 |
21 |
240 |
1456 |
1695 |
|
|
