 |
Simple sequence repeat (SSR)
>UN12021
GATGTAAAAAAAAAGCTTGAAAACACCATAAAGAAGTAAAGATTTACAGTATCTCCTTGTTTCTGAAATCTTAAGTCTCCTCAAGGAAAAAAAA
GACTCTTTATTCCCCAATTAACCAATCAACCAATGTTTAAACAAGAAGAAAAAAAAGAGAGTGAGACTTGCTGATGAATTACAACTCCAAATAA
ACTAAAAGACCTTTAGCTAGAGTTTTTGTTCATGTGGGTGGGGGTGTGTGTGTTGAAGAAGAAAACAAAGAACCGAGAAACAAACAAGAGACAG
TGAGAAAGAAAAGGAACAAAGGGAAAGAATGTGAAGAAAGAATTGTATTCACTGGAAATCAAGATTGGTGAGACCTTGATTTTCAGTTTCTGGT
GTCAGAAGGTGTTTTGAGTTTTTTTTTTTGTTTTTTTGGGTGTTGTTTAGAAACTATGCACACATAAGTACATTTTCTTGGGACGAGGGCAATT
CAGAAACAGTGATTCAGATTTACTGAACCATTGTCAAGAAAGGTGGCTCGGTATGGCCATTGCCTCCTCTGTTTGCAGGGCTCTGAAACGCAAC
CTCATAAGCCGCAGATTTCTCATCCTCGTCTAGTTCTTCATCCATCTCCTCTTCCTCTTCCTCTTCCTCTTCTTCCATGTTATTATAATTGTGA
GACTCCTCAATTTTTTCGTACTCACTTATCATTGAATCTTGTTGTTGTTGTTGTTGTTGGCGTTGCATCAGCTCTTTCATCACAAGGTCTTCTG
GCTTCAATTACAACAAATCACGATTTTAGTTATTAAGAAACAAAAGCAATTAACATTTTGAAAATGAAAAGCAAAGTTTGTACCTTCTCTGTTC
CTTGTGGACTTTCCTCTCTAGCATCTTCTTCCTCACTTGAAGCTGACCCAACAGCTCCTTGTGGGGGCTTCACTGCAGAGACCGGACTCTGCTT
TTGTACTGTTGATATTTGATCTTGAGGTAGGCCGGAAGCGCTAGAACTGCCACCAGTTCCAAGTACCTTGTTGCGGTAAAGAAGATCGAGGCGG
TGAAAATAAGGACAGGTCTTAGCATCTTGAGGACGTTCTTTGTTGCTTTCTTTAACTTTCTTGTAGTATTTGTTTATGTTTTCCCATTTCTCTT
TGCATCTCTTTGCGTTTCTGTTGTATCCCATTCTCTTCATGGAAGATGAGATCTCTTCCCATAAAAGTCCTTTAGGGACATTGTCTTGGTACCT
CGGTTCCATTCCGCTTCTCAGGTTTATAAGCGCAAGAATCTCCGCCTTTGGCCATCGCGATGACGACGGTGAAGGATTGATCCGTGCTCATGAT
CATCTCTTGTTGTGGTTGTTGTTGCTGTTGTTGGTCTAGTTGATGATGAGGAGGAGGAGGAGGGGGTGGAGGAAGGACCTGTTGCTGCGGAATC
GCCATTATTGGTTGCAGTTGAGGTTGTGATGAAGGGCGTTTAGCTGCGGGTGGCGGCGGAGGAGGAGGAGACGGTTGTGATGATAAAGAAGGAG
GTAACTGGATGGTGTGGCCAGTGATTTTCTGAATCAGTGAGATGATCGCGGCGTCGCGAGACGCAGAAGCGGCTCGTTCTTGAGACATGATCTC
GTGTTCCCGAGCTAAACGAGACATCTCTTGGCGTTTCCAAGCTTCTTCTCGATGGAGACGCTCTTGCTCTCTCTTCTCAAGCGCTTCGAGAAAG
CTCCTTTGCATAGCCGCTTGCTTCTGCATCACTTGTCTCACCAAACCTTCGAATAATTCCATCATCTTGCCGCCTCTTCTTCCCCGGTTACCAC
GTTTGCGTTTGCGGCTGCTGGGACCCGCCTGATCCACGTCCATAATATCTTCTTCCTCATCGTCAGACCCCATTCCTGAAGCCGTCGATGAGCT
GTGAGAGGAGAAGGTCACTCCGGGGAAGGTGGGACCCATTGGAGCAGGAGGAGGTGGAGGAGGAGGAGCTGCATTGGGTGTAAAAGAGACACTG
TGCGGTTGGGTCTGTGGTAGAGGAGGGAAGACAGGGAAAGGAGATGAAGAAGGAGGCGGTTGGATGGGATTGGCGACGGAGAGAGGAGTGGCGT
CGAGAGAAGAGGAAGGAGGAGTAGTAGTGTTGAGAGCTTCGAGCTGAGAGAAGAACTTGTAAGTTTTACCGTCATGGCGACCACCGCGCGTTTC
TTTAGTGCGTTTGTAGTATTTCTGAACGTTTTCGAATTTCTCTTTGCATTTCTTAGCACTGCGTTTGTAACCTAGCTCCAACAGCTTCCTGGAA
ACGTGTTCCCAAAGAGGAGCTTTGAGAGTGGCGTCACGGAAAGTAGAATCCATTTCAGATCGGATCCTGAGAAGAGCAAGCGTTTCTTCTCTCG
GCCATCTGTTCCCTGACGAAGAAGACGAGCTTCCTCCTCCTCCTCCCAACCCTCCACCGTCATCCGCCGCCGCTGAGAATCTCATAAGCTCTTC
CATATTAGCCGGAGGTCTTGAGCTGATAGGTGAAGCTTCCTCCACCACTTCATTACCACCACCGCCAACTCCTTGCTCCATCTCTAGATTCACC
AATCCTGATTTGAATCCACCACTCTTTTATTCTACACACACTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTCAAGCTCACGGTTTCTTCATATA
ACCATTGACTATAGAGGAAGAGAAAGAAGCAGCCTTTTTTTTACTGCAACT |
Primers for UN12021 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGACGAGCTTCCTCCTCCTC |
60.096 |
20 |
TGAAGAAACCGTGAGCTTGA |
59.566 |
20 |
256 |
2373 |
2628 |
| 2 |
GTTCCCTGACGAAGAAGACG |
59.844 |
20 |
TGAAGAAACCGTGAGCTTGA |
59.566 |
20 |
271 |
2358 |
2628 |
| 3 |
TGAAGCTTCCTCCACCACTT |
59.844 |
20 |
TGAAGAAACCGTGAGCTTGA |
59.566 |
20 |
154 |
2475 |
2628 |
|
|
