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Simple sequence repeat (SSR)
>UN12178
GGAATCAAACTTAACAGTTCTGCTGTCACAACTCGAGAGACCAAGAAGCAATAGATCTAACACAGCAACTAGTAATTTAGAGCTAAGAATTCAG
GGAGAGAGAGAGAGAGGATGGATAAGATGAATCAGGCTTTCGAGAAGATGAAGATGTTGGTGGGTATGGAGGTTGAAGACGAGGAACGAGCTGC
CGAAGAAGAAAGCTCTCTCTCATTCATGGAAGATCTTAATCGTAATTGCGCTTTGACTACCAAACAGAGATTCTATGGATTTGCGATTTGCTTG
TCAGCTGGCTTGGCATGTACTCTTTTGTCAATGCTTGTTTTCTTCAATCCGATCAAGTTTGGTTTCACATTCACTCTTGGAAATTTGATGGCAC
TTGGGAGGTCCGTATTGGATTTTTTTTTTTAATTTAGCTTGTAACATTACAAGTCTCTGTGAACAAGTATTTTATCCATTTCAACTGTTTTACT
CTCTCTACTCATAGATTTTAAGTTCCATGTCGTTTTTGTATGGCAGCACAGCATTCCTTATAGGCCCACAGAGGCAGGTCTCGATGATGCTTGA
CCCAGCTCGCATCTACGCTACTGCTTTGTATCTTGCCAGCATTATCATTGCCTTGTTTTGCGCTCTCTATGTTCGTAACAAGCTGCTGACGCTA
CTTGCTATCATTCTTGAGTTCTCTGGTCTAATATGGTATAGCTTGAGCTACATCCCTTTTGCAAGGACCATGGTCTCAAAGGTGTTCATGACTT
GTTTCGACACCGAGTTTTGAGCACAGCTCCTATACCCATCAAGGATTTGTCGTCCCAAAACCAGTGTGCTCTGTTCTAATGATCGGTCTGTGTT
CAAAGCTGGACTTGTTTGATGCACGAAGAATGCTGAAAGCTCTGATAGTCTTTGGTTTCTATTTTGCTTCTTAACATGAACTTCATGTCTTCAC
AACTCGCAGCACGGTTTATTGTATATTTTGCTGTGGAATATAACGTAAATTTTGTGCGGGGC |
Primers for UN12178 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTGTCACAACTCGAGAGACC |
60.049 |
21 |
GCTCGTTCCTCGTCTTCAAC |
59.997 |
20 |
164 |
22 |
185 |
| 2 |
GCTGTCACAACTCGAGAGACC |
60.049 |
21 |
AAGCCAGCTGACAAGCAAAT |
60.022 |
20 |
272 |
22 |
293 |
| 3 |
GCTGTCACAACTCGAGAGACC |
60.049 |
21 |
CCTCCATACCCACCAACATC |
60.05 |
20 |
145 |
22 |
166 |
|
|
