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Simple sequence repeat (SSR)
>UN12197
GTTACGGCCGGGGGACAAACAAATTTATTTCATTCATTAGCTAAGTTTAGTTTCTGAAACAAAACATCTAACCAAAAAGAGTTATGACTGGAAG
CCACTTATATTGTCTTATAACCATGGAGAAGAGTTCCTTGTCCAAATGCAAACACTCTTCTTCTTCTTCTTGTTTCACTTTGTTTGGTCTGATC
GATTTTTTCCTCATCAATTTTTTCCAATGGGTTTCTCTCGCTCAGATCTTTTTCTCCAGATCTTGTCCTCTTCTTCTTCAACACCAGCAATGTG
TTTCCGAGAAGAAGAGCAAAGATCTCGATGTCCAGAGCTCCATCAAACATGATGATGGTCTTTGCGGAGAAGATGCGGAGATGGTGATGAGAAG
CTTAGGACTTCTCACGGCCGACTCAAAAAGCGAGGGCCTTCAGAAACGTTACAGTTCGGAGGAGCTTTCGAACCTGTTTGAAGAGAAGGAGCCG
AGCTTGGAGGAAGTGAAGCAGGCTTTTGATGTCTTTGATGAAAACAGAGATGGGTTTCTTGATCCAGTAGATTTGCAAGGATCTAACCTTGAGA
ACTGCAGGAGAATGATCAGATCGTTTGATGGAAACAAAGATGGAAGAATCGATTTCTATGGATTTGTGAAATTCATGGAGAACAACTTCTGCTG
AAAATCATAGTTTATGAAGTAATAATCTATCATCTTCTGCACTCTTTTTATTTTATTTTAACTTCTTTGCTTTAAGATAACGTCTCTTAATATG
GTTTTCTAATCACCTTCTTGTAAAAATTATTGAAGTTTAATATCAAAAGCTCATATAGAGCAC |
Primers for UN12197 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAGTTCCTTGTCCAAATGCAA |
60.103 |
21 |
ATCACCATCTCCGCATCTTC |
60.042 |
20 |
246 |
125 |
370 |
| 2 |
GAGTTCCTTGTCCAAATGCAA |
60.103 |
21 |
CGAGAGAAACCCATTGGAAA |
60.044 |
20 |
104 |
125 |
228 |
| 3 |
GAGTTCCTTGTCCAAATGCAA |
60.103 |
21 |
ATCTGAGCGAGAGAAACCCA |
59.95 |
20 |
111 |
125 |
235 |
|
|
