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Simple sequence repeat (SSR)
>UN12295
TCCGCCAGGTCCGTTCTTCCCCTCCCTCACAGCTTGAGAAGGAGGAAGCGGCTTAGTCGGCAGCTTCCCAGGCTGAACCGGAGCAGGTTTCTCA
ACCTTCAACGGCTTAGCCGCGACGAGCTTGTGGAGATCCTTTGTGTCATCGTCCAAGAGATCGAAAGGGTTAACTGTCGCCATTGATGAATCGA
GAAACCAACTAGTCCCGAGATTATTGTTTTTTGAGGGATTTGTTTTTTTTTTTTTCCTTTTTTGAGGATGAAGAAACACTTAGTGACTATACGT
ATTCATGAAGAAAGAATAAAAATCAGAATCGAGAAGATATGATTCGGACAGCGTTGTTTCGACGCCCAACAAAGTAAGTGTGTGTGTGTGTGTG
TGTGTGTGAGAGAGAGAGAAGGAGGAAGCGGCTTAGTCGGCAGCTTCCCAGGCTGAACCGGAGCAGGTTTCTCAACCTTCAACGGCTTAGCCGC
GACGAGCTTGTGGAGATCCTCTGTGTCATCGTCCAAGAGATCGAAAGGGTTAACTGTCGCCATTGATGAATCGAGAAACCAACTAGTCCCGAGA
TTATTGTTTTTTGAGGGATTTGTTTTTTTTTTTTCCTTTTTTGAGGATGAAGAAACACTTAGTGACTATACGTATTCATGAAGAAAGAATAAAA
ATCAGAATCGAGAAGATATGATTCGGACAGCGTTGTTTCGACGCCCAACAAAGTAAGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAAG
AAGAAGGAAGCTGCGATAAGAGTCC |
Primers for UN12295 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGGTTAACTGTCGCCATTG |
59.993 |
20 |
GGACTCTTATCGCAGCTTCC |
59.034 |
20 |
262 |
516 |
777 |
2 |
AGGGTTAACTGTCGCCATTG |
59.993 |
20 |
GGACTCTTATCGCAGCTTCCT |
59.997 |
21 |
262 |
516 |
777 |
3 |
TCGAAAGGGTTAACTGTCGC |
60.249 |
20 |
GGACTCTTATCGCAGCTTCC |
59.034 |
20 |
267 |
511 |
777 |
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