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Simple sequence repeat (SSR)
>UN12313
CCTAAAGACACCAAATAGTTATTGGCAGTCGTTTCGTCTTCTTCTTCTTCTTCCTTTGAACATCGGAGTTTTCACCGACGAATCGAGCCGTCTT
TCTATTTCTCTCTACGATTCAGGTTTTTTCACTTGGATTCAGAACAGCAAATTGTACTTTTGTTCTTATAGATAATTAATTAGCGACAAAGATG
GATGATTGGGAGACTGAAGACTTTCAACCAACTCCTGCAAAAGTCGAGCTGAAAAGCAATTGGGATGATGAGGATGTTGATGAGGATGTTGATG
AGAATGACATCAAGGAATCTTGGGAGGAGGAGGAGGAGGAGGAGGATGATGAACCTACTCCGGCAGCTGTAGTAAAGCCTGCTCCAAGGAAAGC
TGTTGAAAAGAAGGGTAAACCTGTTGAAGCTCCTCCAAAAGAACCATCAAAGGATGAACCTTTTGATCCTATTGCTGACAAACTTCGCATGCAG
AGGCTAGTGGAGGAAGCTGATTACGAGGCAACTGCTGAACTCTTTGGAGCAAAGACTGATGAAAAAAGCGTTGATGTTTTCATTCCCAAGTCTG
AAAGCGATTTCTTGGAGTATGCTGAGATGATATCTCGTAAACTTTTACCTTATGAGAAAAGCTTTCACTATATTGGGCTGCTCAAAGCAGTGAT
GAGACTTTCTGTGGCCAATATGAAAGCAGCTGATGTTAAAGACGTTGCTTCCTCTGTTTCGGCAATAGGTAACGAAAAACTCAAGGCAGAGAAA
GAAGCTGCTGCCGGCAAAAAGAAGACAGGTAAGAAGAAACAACTGCATGTGGATAAACCTGATGATGATCTTGTTTCGGGTCCTTATGGCGCCA
TGGACGACGATGATTTCATGTAAAAGAAAATGGCTTGGAGATTGCACTTGCCTATGTAGGATATCGGAACTAAGAAGAGGTTTAAATCATATGT
GTTTTCTTTAATTATTTTATTGAAACAATACAAATTAGTAAAAAACAGAGTTGTCTTTTTCATTTGCTTTACTTTTCATTTGGAAAATTCTGTA
GTTAAGATTTTTTTTTTTTACTTTTTTCTTTTTGCAAACACATTTTTTGGG |
Primers for UN12313 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGCAATTGGGATGATGAGG |
59.894 |
20 |
TTTCCTTGGAGCAGGCTTTA |
59.953 |
20 |
133 |
242 |
374 |
2 |
TGGGATGATGAGGATGTTGA |
59.85 |
20 |
CAGCAGTTGCCTCGTAATCA |
60.011 |
20 |
259 |
249 |
507 |
3 |
TGGGATGATGAGGATGTTGA |
59.85 |
20 |
TTTCCTTGGAGCAGGCTTTA |
59.953 |
20 |
126 |
249 |
374 |
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