 |
Simple sequence repeat (SSR)
>UN12396
AATAATGTTTGTTTTTCTAAACCAAAGCCGAACTTGTCTAGATAATACAAATACCATTACAACACTGGTTTGTGGAACTATTCCACAGTCTATC
TTGTGTTGTAACTCAAGAAAACTAATGCAAAAGACACTTTTGAGTTCTCTCATAAGAAAGCACAAGTCCTCCTAGATATAAACAATACAACAAA
AGCATTCTTTGGATCATTTCATTTGCTATCATCTTTTCCTTGTCCCTCTGCTCCATCTTGCTTTCCCCCTCTAAGCCCCACGTTTGCAGCGGTT
CCTCCGAGAGAGGTTTCTGGCGGTTGTTGCATCTGATGCTGCATCCCGTTGTTGTTGTTGTTGTTGATACCCATTGGTCTCATCCCCATGTGTC
CATGCATAGCTTGTTGATGCATATGCTGCTGCTGTTGCGGATCCTGGAGCTGGTGTGGGCTACCAAACTGCAAAGGACCTCTTGGAGGGAAGAT
GCCACCGGGTGGTGCTTGTTGAGCCATCCCTGAAGCTTGTGGGTGCTGTTGCATAAAGTAGCTCGGCGGTTGCATCGCAGGATGATGCGGTGGT
GCCGCCATCTGGGAAGCCATAGCTGGTGGTGGTGTAGCTCCAGCAGTAGATGGAGGAGGCTGAGCATCAGCAATAGCAGCGAGGTACATTAAGT
TCTTCTGGAGAAGAGCTTGGTACTGTGCACACTCTGCAAGTTTTCCAAGATTCTGATTTTCCATGATTGCCATTATCAGCTTCTTGTTCTCCTC
AAGGTACTTTTGGATCTGTTCGGGTGGTGATGTTAGTTGGCGGCATCGAAGGAACCATCGGAAACATTTGCGGAGACTGCTGCTGCTGCATCTT
CCTTTACTTGTCCAATAAAACCAAAACCCTCGAGATTCTACCAAACCCAGAACGATCAAGTCTCCAGCAAATATTATTATAAAGATTATCCCTT
CACTTGGATTCCTCTAGAGAGAGAAGGTCTCCTCCGATTTCC |
Primers for UN12396 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGTCCCTCTGCTCCATCTT |
59.803 |
20 |
AGTTTGGTAGCCCACACCAG |
60.028 |
20 |
218 |
228 |
445 |
| 2 |
GGTTCCTCCGAGAGAGGTTT |
59.676 |
20 |
AGTTTGGTAGCCCACACCAG |
60.028 |
20 |
167 |
279 |
445 |
| 3 |
TTGTCCCTCTGCTCCATCTT |
59.803 |
20 |
TCCAAGAGGTCCTTTGCAGT |
59.844 |
20 |
235 |
228 |
462 |
|
|
