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Simple sequence repeat (SSR)
>UN12421
GATCATGAAGGATTATAGTTACGCAGCCATTCAAAATTATCTATCGCCCCTTGTTGATGCGACATTGCTACTGCTGACGGAGAAAGCAGCTTGC
CAGCAAGTAGAAGACGAGAGTGATGATGATGATGATGTTGGACATGATGAGGTCCTCATGGATGCAGTTTCTGACCTTCTCCCCGCCTTTGCTA
AGTGTATGGGGTCTCATTTCGAGCCCGTCTTTGCAAAACTCTTTGAGCCGTTGATGAAATTTGCGAAAGCTAGACGTCCCGACCAGGACAGGAC
AATGGTTGTTGCTTGTCTTGCCGAAGTTGCTCAAGACATGGGTGCTCCAATCTCTGCCTATGTCGATAGGATAATGCCTTTGGTGCTCAAAGAA
TTGGGATCAACTCATGCAACCAATAAAAGAAATGCAGCTTTCTGTGTTGGAGAGCTATGCAAAAACGGGGGTGAAACTGCTCTCAAATATTTTG
GTGATGTGCTACGTGGACTTAACCCGCTTTTTGGGGAGTCAGAGACAGACCTTGCTGTTAGGGATAATGCAGCAGGTGCTACTGCGAGGATGAT
TCTTGTTCATCCTGAATTAATCCCACTAAATCAAGTACTTCCAGTTTTGTTAAGAGGTCTACCTCTAAAGGAAGATCAAGAGGAGTCCATGGCT
GTATACAGTTGTATCTATTCGCTTGTTTTAGCATCCAATCCACAGATAATACCTCATGTACCGGACCTGGTAAGAATATTTGGGCAAGTGGTGG
AGTCGCCAGTGGAGAAAGTTGAAGTGAAAGCAATAGTAGCAGAACTTTCTCCACCTGATGTCGTTTATGGGGATCAGTTGCATCCTTTCATAGT
GGTCTACCTCCTTCTCAGCTACGCTCTGCTGCGTTGCTTCTCTACTGTTTGATTGAGTTATGTATCTACTGTC |
Primers for UN12421 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATGCGACATTGCTACTGCTG |
60.042 |
20 |
GCTCGAAATGAGACCCCATA |
60.036 |
20 |
156 |
57 |
212 |
| 2 |
ATGCGACATTGCTACTGCTG |
60.042 |
20 |
AAACTGCATCCATGAGGACC |
59.934 |
20 |
108 |
57 |
164 |
| 3 |
ATGCGACATTGCTACTGCTG |
60.042 |
20 |
GATTGGAGCACCCATGTCTT |
59.934 |
20 |
278 |
57 |
334 |
|
|
