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Simple sequence repeat (SSR)
>UN12506
TTTTTTTAAAGGTCTCATTTAAGTTGTCGTGTTCTCTCATGATTCCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGGATGATGAGAC
ATGAGTTTTTGAGATAGAAGGAAGAGCTTTAAGAATCCCTTTGGTGTCCAACTCGGAACTTCTTGGCTTTACGTCCGATCTTGTCGCTAGAGCC
TTCTTTCTTTCTTTCATGGTTTTAGCGACATAAGTTGGCCAGACCCAAGAACCCATCAGAAGTTGAGGGAAGTATGAATTCAACAACAACACAC
TTTGTGCCACCGAGAAGAGTTGGTATATACGAGCCTCTCCATCAGTTTGGTATGTGGGGAGAAACTTTCAAGAACAATATTGGCAATGGGGGAG
ACATGAACAGTCCTAGCCACATTATTATACCGAATTATCAACAAATAGAGAATAACAACTTGTCAGAGGATACTTCCCATGGAACAGGAGGAAC
TCCACACATGTTTGATCAAGAAGCTTCCACGTCCAGACATCCTGATAAGATACAGAGAAGGCTTGCACAAAACCGTGAGGCTGCTAAGAAAAGT
CGCTTGCGGAAGAAGGCTTATGTTCAGCATCTAGAAACAAGCCGGTTAAAATTAATACATTTAGAGCAAGAACTGGACCGTGCTAGACAACAGG
GTTTCTACGTTGGGAATGGCATAGATACTAACTCTATCGGTTTCTCAGACCCATGAATCCAGGGATTGCTACGTTT |
Primers for UN12506 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGTCGTGTTCTCTCATGATTC |
57.795 |
22 |
TTCTGATGGGTTCTTGGGTC |
59.903 |
20 |
226 |
24 |
249 |
| 2 |
TTGTCGTGTTCTCTCATGATTC |
57.795 |
22 |
CGTAAAGCCAAGAAGTTCCG |
59.876 |
20 |
144 |
24 |
167 |
| 3 |
GTTGTCGTGTTCTCTCATGATTC |
58.711 |
23 |
TTCTGATGGGTTCTTGGGTC |
59.903 |
20 |
227 |
23 |
249 |
|
|
