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Simple sequence repeat (SSR)
>UN12528
GGAAGTGTCCACAGAGAGAGAAAGAGAGAGAGAAGAATGAACGAGATGAGCGAGAGAGAGACTAGTTTCGAAGGATCAAACATCAAGAGGATGA
AACTCGATGATGATGACTCAGATGTTTCACGCTCACCGGAGAGGACGGTTTCTTCTTCTTCTTCTCTGGTTTATTCTGCTTCCGATTCTGAAGA
AGAGGCTCTTCAGAGCTCAAGCTGTTCTAGCAGCGAGACTCGTCTGCCATTTTTAGATCTCGAGGGTCGTCATCACCAAATCTCCGAAACCGAA
ATATCGTCGTCATTAATCACCATCAATTTCAGAACCCAAGGAGAAACAGCTGAGATGGACTCTGCCTCGACGACGACCATGGAGACGGAGAGGA
GAGACGGACAAAAGACAGAGAAGAAGGAAAATGCACCGACGCAGGCTGAGCTTGACGACTTCTTCTCGGCGGCGGAGAGACGCCAACAGAAACG
ATTCACGGACAAGTACAACTACGACATCGTGAATGATACGCCGCTTGAAGGTCGTTACGATTGGGTTAGTCTCAAGCCATAAAACGCTAAGAAG
CAGAAGCAGAAGACAACGACGTCGTAGGTACTCTGTGAGTTTTGTCACAGACAGAGAGAATCATAGCTTAGGACCGTTTTATTTCGTTATTGTA
CAGTCAGTCAGTTCTCTCTAGCTAGCTTCCTTATTTATCTTCTTCTTATGTTCTTCGTACCATGAGAAACAAAAAGGACGCTGCTTTCTTTTCG
AAATTTATCATTTTTAATGTCTAGTTTAACTATCAAACCAAAA |
Primers for UN12528 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCAGATGTTTCACGCTCACC |
59.837 |
20 |
CTCAGCTGTTTCTCCTTGGG |
59.982 |
20 |
225 |
112 |
336 |
2 |
TCAGATGTTTCACGCTCACC |
59.837 |
20 |
CGATATTTCGGTTTCGGAGA |
60.031 |
20 |
177 |
112 |
288 |
3 |
TCAGATGTTTCACGCTCACC |
59.837 |
20 |
TCGCTGCTAGAACAGCTTGA |
60.035 |
20 |
113 |
112 |
224 |
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