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Simple sequence repeat (SSR)
>UN12904
GGAAACGAAGACTTTCTGGATAGAAAATTAGGGTTTTTTTCCCTTTCTCGCAAAGTCTTTGTCTGGATTGTTGCCGATCCAGCGATGGAAAGAT
CCGAATCCCCTCCACCGAAGCGTCAGAAGATGGAGGAAACAACGTGCTATAATGGCCGTCCAGAGGATTTTGATTCCGACGAGTGCTCCGACGA
GGAGATGCAACTGTTCGAGCAAGAGTTGGATAAGATCGGCGGGGGTTATGAAATCGACTTCAAGAAATTTCGTTACTGTTTTGGATGGAAAACC
ACTGGATCTGGATGACAGTACAATGGTTTATGAACCTGAAACTAACAGAGATTTCATAGGGAAGTTGGCGAACCTGGCTCTTACCAAACATAAC
GCAGACCGGGGAACAAGCTTTGAACTGGGAAAGATTATGATTGCCAACTTTCATCTATCTTGTGGATTCTCCTTCTACATCTCATTCCAAGTCA
ATGATCCTTCAGAAGAAGATGGTAATCAGACAAAACCCTTTTCGAGCAGTGGTTCGCTACTTTCCTGGAGATATTGAAGTTGTCTCTTGCAATC
CAAAAGATTGAATTCTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTTTATAGCAATCCACCCGC
TTGTTTCTGATATCATCACACATCTATCCTACCATCATTATCCTATCCTATCTATGAAACTGCTAGCTCTTTTCTTGTTTCTGTTTCCAACTTG
TTTGCTTGGTGTGGTGTTTAAGT |
Primers for UN12904 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCAGTGGTTCGCTACTTTCC |
59.882 |
20 |
AACACCACACCAAGCAAACA |
60.049 |
20 |
255 |
516 |
770 |
| 2 |
GCAGTGGTTCGCTACTTTCC |
59.882 |
20 |
ACACCACACCAAGCAAACAA |
60.049 |
20 |
254 |
516 |
769 |
| 3 |
GACAAAACCCTTTTCGAGCA |
60.227 |
20 |
ACACCACACCAAGCAAACAA |
60.049 |
20 |
271 |
499 |
769 |
|
|
