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Simple sequence repeat (SSR)
>UN12958
GCAAAAGACATCAAAATTTCAAAAGGACTAATCCTTAGTATGCACATGTACAAAAAAGTGATTTTGCCTCCAAGCTACAAAGAAGAAGAAGAAG
AACAGAGGTATACAAAGAAAACTGCAAATGATCACCATGAAAGCTAGAAGAAGGGGAATAACAGGTACTCTGCATAGAAGAGATTCCATATAAA
TCGGTAATATCCTGCAATAGCTTCCTTTGTGTAGTTTGCTTTTTCTAGCACCCATGTCTGGAAAATCAAGCATGAAGCCAAGATCATATGTGCA
GGAATCATCAAGCTACCTCTAAAAACCTGAGGCATGTAGAAAGCTAGTGATACAGCAGAAATATAGTTAACTAGCAGAAGTCCGGAACCGAGGA
ATGCAATGTTCCTCACTCCAAGCTTTGTTGCTAGAGTTGATATTTGGAACTTGCGATCTCCTTCAACATCAGGAAGATCTTTTGTGATAGCAAT
GACCAGTGCAAACAATGTCACAAATGACGTTATGAAAGCCACAGGTGCACTCCACTGAAACGAAAGTCCAAGGGCAGCTCTAGTAGCATGGTAC
ACACCAAAATTAAGAAGGAAACCTCGTACCGTGGCAATAATAAGAAACGCTGCAACTGGAAACGCGCGATTCTATCAAGAACTGGATCGGAACC
AGCAGCACCTACCTGAGAACATGCCCTGATCGAGATTTTTCTGTAGTTAGTTGAAACAAATTTGGACCGCATACATGAACTTGATAAGCTCGTG
AAGCCAACATCTTGGGACCGGCTTAGAAGCTTCCCAGCTAAATGCACAGAAGGCCGATGGTGATGATGAGAAGCTGCTAAGAAACGAGGTGATA
CAGACGAGAACCGAAGAGAAGGTGGTTGAGAGATTGAGAGCTCCATTGATGCCACTAGCCACACACCC |
Primers for UN12958 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGTGATTTTGCCTCCAAGC |
59.316 |
20 |
GATTTTCCAGACATGGGTGC |
60.326 |
20 |
200 |
56 |
255 |
2 |
AAGTGATTTTGCCTCCAAGC |
59.316 |
20 |
GGCTTCATGCTTGATTTTCC |
59.651 |
20 |
212 |
56 |
267 |
3 |
AAGTGATTTTGCCTCCAAGC |
59.316 |
20 |
ATTTTCCAGACATGGGTGCT |
59.41 |
20 |
199 |
56 |
254 |
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