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Simple sequence repeat (SSR)
>UN01290
TCCCAAAGGAGACAAGACACACGTTCGCCTTAGTTGTCCGTTGTAAAAGGTATCTTCGACGGGACTCCGAAGCAAGAAGACACAACACGAAACC
GATCTTCTTCCTCTTTCTTCTTGTCCTCGTTGGTGCTTGTTTGATCGATCTTCTCAGATAAGGTTCCTAGGGGTTTAGGTTTGCTTCTATGACC
CGGACACGTTGCAATCGGTGCTCCATGTCTAGGTAAATGAAGGCTTTAACTGATAGGTTTGTTCCTCAACCATCATCAAGCAAGAGTGAAACAT
CTCTAGTTTCGTCAGATTTAGAAGCTAGCGATAATAATAATAATAATAAGTCCAAGTTTACCTTGCGGTCGGAGTCTTCAACCTCGGGGCATAA
GCAAGTTTGCGCTGCTACTTGGACATCGCTTGTAAAGAAAGTCTCTATGGCGAGTGGTGCGATCAAGAGGTTCCACGATCGTGTTTTGGGACCA
AACAGGACTGGTCTTCCGAGCACTGCTAGTGACGTCTGGCTCTTGGGCGTCTGTTATAAAATATCTGAGGACGAACCCTCAAGGGAAGAAACGG
ATGATGGAAGCGTAGTGGCTGAACTGAAACAAGATTTTTCTTCCAGAATACTGATGACATATCGTAAAGGTTTTGAGCCTATTAAAGACACAAC
CTACACGAGCGATGTAAACTGGGGTTGCATGATACGGAGCAGCCAGATGCTGTTTGCTCAGCATTGCTTTTCATAGACTGGGGAGGTCTTGGAG
GATCA |
Primers for UN01290 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
GTTTGCTTCTATGACCCGGA |
60.074 |
20 |
CAAGCGATGTCCAAGTAGCA |
60.011 |
20 |
236 |
173 |
408 |
| 2 |
TTTGCTTCTATGACCCGGAC |
60.074 |
20 |
CAAGCGATGTCCAAGTAGCA |
60.011 |
20 |
235 |
174 |
408 |
| 3 |
ATCGGTGCTCCATGTCTAGG |
60.096 |
20 |
CAAGCGATGTCCAAGTAGCA |
60.011 |
20 |
207 |
202 |
408 |
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