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Simple sequence repeat (SSR)
>UN13008
GGGTTTCTTCGAAGTTTCTTCACTGTGCGTCAAAAGATTTTCTCTCAGAGGTTTTCTCGGGGGAAGAAGAAACTGACTACATCTTATATAAGAT
CCTAGAGAGAGAGAGAGAGATCTAAACAGGTTCGTCTCCGATGGGACCGCTTCAGTCATTCCGAAGAGCGTACGGAGCCTTAAAAGACACCACT
AAAGTCGGCCTCGTCCGAGTCAACAGCGATTACGCCGATATAGAGGTTGCCATAGTCAAAGCTACTAACCATGTTGAGTGTCCTCCCAAGGATC
GGCATCTCAGGAAGATCTTCATAGCAACATCCGCAACTAGGCCTCGAGCGGATGTTGCTTACTGCATTCACACTCTCTCTCGTCGATTGCACAA
AACCAGAAACTGGACGGTTGCGTTAAAAGCGTTGCTTGTTCTACACCGGCTTGTAAGGGAGGGAGATCCTACATTTAGAGAAGAACTTTTGAAC
TTTTCGCGAAAAGGACGCTTCCTGCAGCTTTCTAATTTCAAGGATGACTCATCCACAGCGGCATGGGATTGTTCGGTGTGGGTACGCGCTTATG
CTTTATTTCTTGAGGAACGGCTTCAGTGCTTCAGAGTTTTGAAATATGATATTGAGGCTGAACGTCTTCCTAAAGTTTCCCCGGGGCAGAG |
Primers for UN13008 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTCGGGGGAAGAAGAAACT |
60.183 |
20 |
GATCCTTGGGAGGACACTCA |
60.048 |
20 |
228 |
55 |
282 |
| 2 |
TCTCGGGGGAAGAAGAAACT |
60.183 |
20 |
TCCTTGGGAGGACACTCAAC |
60.088 |
20 |
226 |
55 |
280 |
| 3 |
TCTCGGGGGAAGAAGAAACT |
60.183 |
20 |
AGATCTTCCTGAGATGCCGA |
59.91 |
20 |
246 |
55 |
300 |
|
|
