 |
Simple sequence repeat (SSR)
>UN13068
CTTTCTTGTCTTGTTCTGATATTTTTCCTCCATTATTCCTCCTCTTCTTCATCTCTCTCTTTTTTTTGGTTGGTGGTAGAGATTAATCTCTCTC
TCGCTTCCTGCTCTCTGTATCGTGATCATCGTCGCTGTTTGGTAACTGCACTTTTTAGAGAGGTAGAGAGATCAAAGAAGATAAATGGATATTC
CACAAGACGTAGCTGGAGCTTGGGGGATTCCCTCTGGAATGGGACGCCACCACCGTCATCTCCCCAATGATGCTTCTCTCTTCTCCGCTTCTTT
ACCTGTTCTTCCCCATGGAAAACTACAATCAAGTGACAGCAGAGACGGTTTCCCATTCCTAGACGACGCGGCTGCTTCTCGTGGTCCCATCCAC
GACCACGACATTGAGTCTCATTCCATTATGCTCCCTGACGAAGACGATCTTCTCACTGGGATGATGGACGATCTTGACCTCACCGAGCTACCAC
CAGACGCTGATGAGTACGATCTCTTCGGCAGCGGAGGAGGCATGGAGCTCGACGCTGACTTCCGTGACGGCTTGACCATGAGTGGTGGTGGTGG
TGGTGGTGGTCCTCCAAGGCTAAGTCTCGGTGGTGGGAATAATGCACCAGTTCCGCAGTTCAATGTTCAGAACGGCGCTGCTGGAACTGGAACA
ACGGTTGCTGGCGAGCATCCTTACGGTGAACATCCCTCGAGAACGTTGTTTGTCCGTAACATTAACAGCAACGTAGAAGACTCTGAGCTCAAGA
CTCTCTTTGAGCAATACGGTGACATTAGAACGCTCTATACTACTTGTAAGCATAGGGGATTTGTGATGATATCTTATTACGACATCCGTGCTGC
TCGAATGGCTATGCGGTCTTTGCAGAACAAACCATTAAGACGGAGGAAGTTGGATATCCACTTCTCAATCCCTAAGGATAATCCATCTGAGAAG
GATATGAATCAGGGGACACTAGTGGTTTTTAACCTGGACCCTTCCATAACTAACGATGACTTGCATGGAATATTTGGTGCTCACGGCGAGATCA
AAGAGATAAGGGAGACACCGCATAAGAGGCACCACAAGTTCGTAGAGTTTTATGATGTACGGGCTGCTGAAGCAGCTTTAAAGGCTTTAAATAG
GTGTGAGATTGCTGGAAAGCGTATTAAAGTTGAACCTAGTCGCCCTGGAGGAGCTCGTCGAAGCTTGATGCTGCAACTTAACCAAGAGCTTGAG
AACGATGATTTGCATTACCTACCTCTGCTTGGTTCACCCATGGCAAACTCTCCTCCAAGTAACTGGCTGCAAATGAACAGTCCCGTTGAGGGAA
GTCCGCTTCAGAGTGTGCTGAGCAGGTCACCAGTTTTCGGAGTAAGTCCTACAAGGAACAGCCACTTGTCTGGTTTGGCTTCTGCTCTGAACAC
ACAAGGACCGAGCTCCAAGCTTGCACCCATCGGTAGGAGTCCAGTCAATAGCAACGTCTTCCAACAGACGTCTCATCTGTTCCAAGAGCCAAAG
CCGGATAACAACAAGTACAATGGAAACCTCTCTCCCTCTGGTCCTTTGATCTCGAACGGAGGCGGCATCGAGACGTTATCCGGGTCAGAGTTCC
TCTGGGGCAGTCCCAACACACGCTCTGAGCCTTCAAACTCTTCGGTTTGGTCAACATCATCCACCGGGGTTCCCTTCTCCTCGGCTCGTGTAGA
CCGGTCTGTTCCGTTTCTGCACCAAACACAAAACCGCATCCATCATCATCATCATCATCTCCACGTTGGGTCTGCACCATCTAATGTTCCTCTA
GAGAAACATTTTGGATTCTTCCCGGAGTCTTCAAAGGACACTATGTTCATGAACACAGTTGGTGGTCTCAACGGTGGGAGTTTCCCGTCAAGAA
TGGCTAATCATGGGATTATGAACCCTGAGAACGGTTTCTCGAGTTACAGAATGATGTCTTCGCCGAGGTTCAGCCCTATGTTCTTAAGCAGCGG
TCTAAACCCTGGACGGTTCACCTCTTCTGGTGTTGATGGATTGTATGAGAATGGAAGGTCCCGTCGAGTGGAGAACAGTTCGAGCCAGGTTGAA
AGTAGGAAGCAGTTCCAGCTTGATTTGGAGAAGATTATGAATGGAGAAGATTCTAGGACTACCTTGATGATTAAGAACATTCCTAACAAATACA
CTTCAAAGATGTTGTTAGCGGCGATTGATGAAAAGAACCAAGGCACTTACAACTTTCTCTACTTGCCCATTGATTTTAAGAACAAATGCAATGT
TGGCTATGCATTCATCAACATGCTCTCTCCTGATCTCATTATTCCATTTTACGAGGCGTTTAACGGGAAGAAGTGGGAGAAGTTCAACAGTGAG
AAAGTGGCTTCGTTGGCATACGCTAGGATACAAGGCAAAACTGCACTTATAGCCCATTTTCAGAACTCGAGCTTGATGAATGAAGACATGCGTT
GCCGTCCAATCATTTTCGACACACCTAACAGTTCAGACTCTGTTGAACAGGTTATTGTTAAGGAAACTAAGAACGGGGATTTATTTGACTCTGA
GGTTAATGATGATGGCGATGGTAGAGAGAAGAGCTGACCCAAGAGAGAGAGAGAGAAGACTCGGTGTTGTGATCATGGCTTTGTTTTTTTCTTT
TTCAAGTACTAATTATTAACCGTACATAATGGGTGAAAGGCAGAGTTATAACTGATGCAGGAGCCTTGCAAAAGTGTGTTTTGCGATTTGCAGG
TTTTAAATGCTGCAGCTGGAGAGTATCTATCTTATCTTACTCTACTCTGTTTCTTCTTTTCTCTTCATGTTTTTTTTTTTTGGTTTGGTTCCAT
GGAGCACTGTATATTATAAAGAAAAGCCATGAATACTCGGATTTTATGTGGGTAATGATGTTGTAACTCTCTCTGTGACTCTTGTTGCTTTTAT
TTATTAAAAGGC |
Primers for UN13068 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAGACGTTATCCGGGTCAGA |
60.073 |
20 |
GAAGACTCCGGGAAGAATCC |
60.015 |
20 |
245 |
1574 |
1818 |
| 2 |
CCTCTGGTCCTTTGATCTCG |
59.797 |
20 |
GAAGACTCCGGGAAGAATCC |
60.015 |
20 |
280 |
1539 |
1818 |
| 3 |
GAGACGTTATCCGGGTCAGA |
60.073 |
20 |
TTTGAAGACTCCGGGAAGAA |
59.784 |
20 |
248 |
1574 |
1821 |
|
|
