 |
Simple sequence repeat (SSR)
>UN13068
CTTTCTTGTCTTGTTCTGATATTTTTCCTCCATTATTCCTCCTCTTCTTCATCTCTCTCTTTTTTTTGGTTGGTGGTAGAGATTAATCTCTCTC
TCGCTTCCTGCTCTCTGTATCGTGATCATCGTCGCTGTTTGGTAACTGCACTTTTTAGAGAGGTAGAGAGATCAAAGAAGATAAATGGATATTC
CACAAGACGTAGCTGGAGCTTGGGGGATTCCCTCTGGAATGGGACGCCACCACCGTCATCTCCCCAATGATGCTTCTCTCTTCTCCGCTTCTTT
ACCTGTTCTTCCCCATGGAAAACTACAATCAAGTGACAGCAGAGACGGTTTCCCATTCCTAGACGACGCGGCTGCTTCTCGTGGTCCCATCCAC
GACCACGACATTGAGTCTCATTCCATTATGCTCCCTGACGAAGACGATCTTCTCACTGGGATGATGGACGATCTTGACCTCACCGAGCTACCAC
CAGACGCTGATGAGTACGATCTCTTCGGCAGCGGAGGAGGCATGGAGCTCGACGCTGACTTCCGTGACGGCTTGACCATGAGTGGTGGTGGTGG
TGGTGGTGGTCCTCCAAGGCTAAGTCTCGGTGGTGGGAATAATGCACCAGTTCCGCAGTTCAATGTTCAGAACGGCGCTGCTGGAACTGGAACA
ACGGTTGCTGGCGAGCATCCTTACGGTGAACATCCCTCGAGAACGTTGTTTGTCCGTAACATTAACAGCAACGTAGAAGACTCTGAGCTCAAGA
CTCTCTTTGAGCAATACGGTGACATTAGAACGCTCTATACTACTTGTAAGCATAGGGGATTTGTGATGATATCTTATTACGACATCCGTGCTGC
TCGAATGGCTATGCGGTCTTTGCAGAACAAACCATTAAGACGGAGGAAGTTGGATATCCACTTCTCAATCCCTAAGGATAATCCATCTGAGAAG
GATATGAATCAGGGGACACTAGTGGTTTTTAACCTGGACCCTTCCATAACTAACGATGACTTGCATGGAATATTTGGTGCTCACGGCGAGATCA
AAGAGATAAGGGAGACACCGCATAAGAGGCACCACAAGTTCGTAGAGTTTTATGATGTACGGGCTGCTGAAGCAGCTTTAAAGGCTTTAAATAG
GTGTGAGATTGCTGGAAAGCGTATTAAAGTTGAACCTAGTCGCCCTGGAGGAGCTCGTCGAAGCTTGATGCTGCAACTTAACCAAGAGCTTGAG
AACGATGATTTGCATTACCTACCTCTGCTTGGTTCACCCATGGCAAACTCTCCTCCAAGTAACTGGCTGCAAATGAACAGTCCCGTTGAGGGAA
GTCCGCTTCAGAGTGTGCTGAGCAGGTCACCAGTTTTCGGAGTAAGTCCTACAAGGAACAGCCACTTGTCTGGTTTGGCTTCTGCTCTGAACAC
ACAAGGACCGAGCTCCAAGCTTGCACCCATCGGTAGGAGTCCAGTCAATAGCAACGTCTTCCAACAGACGTCTCATCTGTTCCAAGAGCCAAAG
CCGGATAACAACAAGTACAATGGAAACCTCTCTCCCTCTGGTCCTTTGATCTCGAACGGAGGCGGCATCGAGACGTTATCCGGGTCAGAGTTCC
TCTGGGGCAGTCCCAACACACGCTCTGAGCCTTCAAACTCTTCGGTTTGGTCAACATCATCCACCGGGGTTCCCTTCTCCTCGGCTCGTGTAGA
CCGGTCTGTTCCGTTTCTGCACCAAACACAAAACCGCATCCATCATCATCATCATCATCTCCACGTTGGGTCTGCACCATCTAATGTTCCTCTA
GAGAAACATTTTGGATTCTTCCCGGAGTCTTCAAAGGACACTATGTTCATGAACACAGTTGGTGGTCTCAACGGTGGGAGTTTCCCGTCAAGAA
TGGCTAATCATGGGATTATGAACCCTGAGAACGGTTTCTCGAGTTACAGAATGATGTCTTCGCCGAGGTTCAGCCCTATGTTCTTAAGCAGCGG
TCTAAACCCTGGACGGTTCACCTCTTCTGGTGTTGATGGATTGTATGAGAATGGAAGGTCCCGTCGAGTGGAGAACAGTTCGAGCCAGGTTGAA
AGTAGGAAGCAGTTCCAGCTTGATTTGGAGAAGATTATGAATGGAGAAGATTCTAGGACTACCTTGATGATTAAGAACATTCCTAACAAATACA
CTTCAAAGATGTTGTTAGCGGCGATTGATGAAAAGAACCAAGGCACTTACAACTTTCTCTACTTGCCCATTGATTTTAAGAACAAATGCAATGT
TGGCTATGCATTCATCAACATGCTCTCTCCTGATCTCATTATTCCATTTTACGAGGCGTTTAACGGGAAGAAGTGGGAGAAGTTCAACAGTGAG
AAAGTGGCTTCGTTGGCATACGCTAGGATACAAGGCAAAACTGCACTTATAGCCCATTTTCAGAACTCGAGCTTGATGAATGAAGACATGCGTT
GCCGTCCAATCATTTTCGACACACCTAACAGTTCAGACTCTGTTGAACAGGTTATTGTTAAGGAAACTAAGAACGGGGATTTATTTGACTCTGA
GGTTAATGATGATGGCGATGGTAGAGAGAAGAGCTGACCCAAGAGAGAGAGAGAGAAGACTCGGTGTTGTGATCATGGCTTTGTTTTTTTCTTT
TTCAAGTACTAATTATTAACCGTACATAATGGGTGAAAGGCAGAGTTATAACTGATGCAGGAGCCTTGCAAAAGTGTGTTTTGCGATTTGCAGG
TTTTAAATGCTGCAGCTGGAGAGTATCTATCTTATCTTACTCTACTCTGTTTCTTCTTTTCTCTTCATGTTTTTTTTTTTTGGTTTGGTTCCAT
GGAGCACTGTATATTATAAAGAAAAGCCATGAATACTCGGATTTTATGTGGGTAATGATGTTGTAACTCTCTCTGTGACTCTTGTTGCTTTTAT
TTATTAAAAGGC |
Primers for UN13068 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGATGATGGCGATGGTAGAG |
59.629 |
20 |
AAACCTGCAAATCGCAAAAC |
60.117 |
20 |
185 |
2545 |
2729 |
| 2 |
GTTGCCGTCCAATCATTTTC |
60.318 |
20 |
ACACACTTTTGCAAGGCTCC |
60.299 |
20 |
270 |
2442 |
2711 |
| 3 |
TGAGGTTAATGATGATGGCG |
59.499 |
20 |
AAACCTGCAAATCGCAAAAC |
60.117 |
20 |
194 |
2536 |
2729 |
|
|
