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Simple sequence repeat (SSR)
>UN13090
GAATAATAATGTTCTGAGTAGCATAAATTTATAAAATGTTACAATGAAGTAAGAAAATATTATTATTCAAGAAGGTAACAAACTGTATAACATC
TCCTCCAGAACAGAAACTCACCGGAATCTAAAAAGACTCCGGCCAAATAAATTACAGTATCTTGAGTGCCACCTTAATATTTCCTTCTTTTATT
TTCAAAATATATTACGAAAAATAAAAAATGAAATATATAGAACACAAACAAACATAACAGATGGAGACTGAGATGAAGAAGAAGCATCAAACCA
ATCTCTCATCAATTTCAAGCAAGGTTGATCGTGAAGGAGACATAAGGATGTGTCTCTGAGTCACCTGCTAAACCAGCCATGGCAGCTCCTCCAT
CCTCCTCGCTTTTCCAGTATAAACTGTTGGTAGAATCACACAAGCGTTCAAGAATGGAGCGCACTTTCTTTTCACTCTTCACAGCCGGAGATAA
GACGCATGCCAAGAACGCAGGAGGTAAACCATATCTCATAATGCTCTCAGCGAATATGCGCACAGCACAGAAATGCATCCAGGAGCTGAAAACC
TCTCCATAGCTGGTGTAGCACCATTGCAAAAGAGAGGTTCTCAAACTTTCCTGATCCTGAACCAACTTTTCTAGCTCTTGTTTACGAGTCTCTT
GTGCTTCAACGCTATGTTCAAAATCACGGATTTGGAACCCTTTCTCACGGGCACTTGTCCTGTAATTGTCTGCAACACGAGTAAAGAGAGTGAC
GGTGTAAAGAGCATACTCATTATCCTCAAACAATTTCTTCGAGGACCTAGGAACCACATATTCGGTTAATGTCTCATAACATGCTAGCCAGTCT
TTCTGGGAGTACTTTGGAACAACAGCAAGGAGAGTCACGAGATGCTCTGACGCGACAATATCTTCTGCCTTAACCAAGTTTGAGAGGTCACGAA
CAGCTAAGCTCCCACTCTGCTTTCGGTTAATGGCATTGAGTTGACCGCGGACATTGTTATACTCAGCGACACGAACCTTGAGATCATCCTCAAT
CTTGGCTACCTGAGACTGAATATTCTCCACAACCTCCTTCAAAGGTGACATTGTTGGGTACTTAGCTTCATCCCACACAAACCTGGTGAGATAA
GAATCAACAGGAACTCCATCAACAGTAAGAGCATTGCTCTCAACACCAGAAATCCTCTCCAGCTCCTCGATCTGTCTCCTGATCTTCTGAGAAA
CTCCTTCCACAAAGCTATTCGACTTGAGCAGATCATCGCCGAGGGCGAGAAGAGAATCTAAGGTTCCAACACGAAGATTAGGGATGTTGAACCG
ATAAAGAGGAGTATCAAAGGAATGCTTGGAGATCTGCTCTTGAAGACGATTCCACGAGGTGGAAGAAGAGTCCTTCACTGGTAGAGACACCACC
CAGTACCTCGAAGTCATTGTTTCTCAATCTGACTCTCTCTCTCTGTCTTCTTCTTCTCCGATGGATCTCTCTCTACTTCTTCCCC |
Primers for UN13090 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCGACTTGAGCAGATCATCG |
60.096 |
20 |
GAGAGAGATCCATCGGAGAAGA |
59.919 |
22 |
243 |
1241 |
1483 |
2 |
TCCACGAGGTGGAAGAAGAG |
60.377 |
20 |
GAGAGAGATCCATCGGAGAAGA |
59.919 |
22 |
117 |
1367 |
1483 |
3 |
TGCTCTTGAAGACGATTCCA |
59.522 |
20 |
GAGAGAGATCCATCGGAGAAGA |
59.919 |
22 |
133 |
1351 |
1483 |
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