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Simple sequence repeat (SSR)
>UN13097
TTTTTATTTGAAGTTTTGCATAAAAACAGATAATAATAGCTCCAAAAGTGTCGAATTACAAAACAATCAAAAGCCAAAATAATGGTTTCTTTTA
TGGAAAAATGAAAGAGTCACAAGGATATGCTCCAATTTATTTGCAAAATCTCATTTTCAAGAGATACCTTGAGAGAACATCATACAAACAAAAC
AAAAGGAGAGAAACCACGAGAGATCAGCTAGACATAGGATGGTTGAAAACGTATTCAATGGCAAGAGGGCAAGAGTCGATCTTGTCAGCTTCTT
TGTCTGGGATCTCAAGCTTGAACTCCTCTTCAATAGCCATCACTATCTCCACAGTGTCCAAACTATCTAATCCCAAATCCTTTTGGAAATGAAC
TTCAGGAGTCACCTTAGCTGGATCGACTTTAGGGAAGCACTTGACAACATCGAGAACTCTGTCGACGACATCCTGCTTGCTGAGATGATCATCG
TGAGAAGAGAAAGCACGGATCGAACCAAGGTACCCAATTTGAGGCTGGTTCGACGCCGTCACGGGAACTCTGAGGTGACGAAGGACTGCAGTTC
TCAGTGCCATCTCCGTCGAGCTCTCGAGATTTAGGGATTTGGATGAGAGAGAGAGAGAGTGATACACCGAAAGAAACGAAAGTCC |
Primers for UN13097 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CATCCTGCTTGCTGAGATGA |
60.096 |
20 |
GGACTTTCGTTTCTTTCGGT |
58.293 |
20 |
205 |
445 |
649 |
2 |
GGGAACTCTGAGGTGACGAA |
60.238 |
20 |
GGACTTTCGTTTCTTTCGGT |
58.293 |
20 |
117 |
533 |
649 |
3 |
CATCCTGCTTGCTGAGATGA |
60.096 |
20 |
GGACTTTCGTTTCTTTCGGTG |
61 |
21 |
205 |
445 |
649 |
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