 |
Simple sequence repeat (SSR)
>UN13232
AAAACTTTAAAAATTCAACACATGTCAAAAAAAAAGACCAAACAAAGTGGATTCTACTCTTTTTTTTTAATCTTTTTTTTTTGAACACATCAAG
TGGATTCTATATTACTCACAAATGAAGATACAAATCAAAGCAGACCAGTGCTGCGGAACGGGTTATTATTGTGTTGGTTAACCGCGAAATCACC
AAACCCGCTCGTATTTGGCTGCTGTGAAACCGGGTTAACCGGGAATTCCCCAAACTCACCGAATGGATTATTACTGTAATTATTATTGGCTGTG
GGGTTTGGGAGTGCTAGCTGTAGTTGCTGCTGCGGCTGATGATGATACGTTGGCTGGTAAGCACCAAAAGGGTTGTTGACAGCTGACTGCTGAG
CTGCTGGATTGCCATTGGACGATGCAAAAGGGTCATGATGAACCTCAAATGGGTTGGGAGCTGGTGCACCGTAGACAGGACGTTGGGAGGCTAT
GTAGGCTCCATCATCGTATAGACTGTTTAGTGTAAGCGTGTCTAAGCCTCCACCCAATTGCCTATCGGTGGCTGCAGAGATATCGTTGCTTGGT
GTTGTTACCAGGGCAAGCTCCCATCCTGAAGGGTCATAATCGTTTGCGTGACCAAACCGAGGCGTTGAAGGGTTACCATCAGTTGAGATTATGG
CTAAAGCAAGTGCGTTTTGGTTCTCAATCGCTGATGCATCAGGACCACCAGTGTTCAGACCCAGTAGATCATCTGTATCAATGATGTTCTGAGA
CTGAGTGTTGGCTGAAGGAGGAGGAGGAGGAGGCGGGGGAGAAGGTTCAGTCTCTTCAGATACAAGAACGACATCATCTGAAGGCAACACAACT
TCACGTTCTACATGAGACGGTTCAGCATCTTCGTCAGGAAGTCCATCATCCGGCCTATAAGTTAGAAGCAGTGGCTCAGCTGGGGCATCGACGG
CACGTGGGGCTTCTTTGATATACTCCTCCATTGTACTCAGAAAAGATTGTGGGGGCTCTCTTAGTACAGGAAACTGAAAATTCCTTGCGAGTTC
CAATCCTTTACAGGCTTCATAGAATTCAGAGAGGCTACGAGCCTGTTGACCAGCACGCTTGTATATTTCAAGGGAACTGATGGCTTCGTGTTTT
GGCATTTCAAAGAACTTGTCAATGAGATTGATAATTCCATCATTGATAGCACAATAGACTTTAAAACTCTCCTTTAACACCAGAGCAAGTGCAT
ATTGTATAACATGGTTGTGGTTAGCAGCACCTTCCGGCCTGCAACCAATGAGACGATAGAGAAGCTGCTGCAAAGCAGGCACCTGCACCAAGAT
TTCTTCCCCATCTAAATCCCTGGTTCTACTATACCCCTTATCCTGCCCTGGGGTAGCCTTTGGAAGACGCTCAGCCTCAGTATCATATTTCAAA
ACCTTGAAGCACTCAAGCCGTTCCTCAAGAAACAATGCATAAGTACGTACCCAAGCTGAGCAATCCCAAGCAATAGGACTTGAATCATCCTTGA
AATTAGAAAGCTGCAGAATCCTCCCTCTCTGCGAAAAGTTAAGTAGCTCCTCCCTAAACGTCGGATCTCCTTCCCTTAGAAGCCGATGAATCAC
AATCAGCGTCTTCAGTGCAACCGTCCAGTTTCTTGTTTTGTGCAAGCGGCGAGAAAGGGCGTGAATGCAATAAGCAACATCTGCTCGAGCACGA
GTCACTACTGTTGCAGCGAATATTTTTCTGAGATGACGATCTTTGGGAGGACACTCGACGTGGTTGGTGGCTTTGACGATGGCAACGTCTAAAT
CGGCGTAATCGCTGTTGACGCGGACAAGGCCGACTTTGGTGGTGTCTTTTAGGGCTCCATAAGCTTTACGCCATGTCTGCATCGTTCCCATCGG
ATCAGGCGAGACTCGTTCAGATCTCTCAACTCTCCCGACGAATCCGGAGATTACGTGTCTCAATCTTCAACCTCCGGGGAAAATTCACAGAGAA
AGCAAAGTGAAGAAGGAGACGCGATTTATTCCGCTTTCTCTTTTTTCTGTTTTCTTTTTATTTAAAGAAGGAAATTATCCC |
Primers for UN13232 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCAAGTGCGTTTTGGTTCT |
59.92 |
20 |
CTTATAGGCCGGATGATGGA |
59.878 |
20 |
245 |
663 |
907 |
| 2 |
CAAGTGCGTTTTGGTTCTCA |
59.881 |
20 |
CTTATAGGCCGGATGATGGA |
59.878 |
20 |
243 |
665 |
907 |
| 3 |
TTGGTTCTCAATCGCTGATG |
59.799 |
20 |
CTTATAGGCCGGATGATGGA |
59.878 |
20 |
233 |
675 |
907 |
|
|
