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Simple sequence repeat (SSR)
>UN13276
GGAAGCAAGCATCATAATAGAAAATTCAAAAGAATGAATACAAACAAAAAAAATGATAATCTGGAGGAGTTATTGTTAAACAATATAAAATAAG
CACGCAAAACTTCATAGGAAATACAGAGTGCATGAAAACAACTTATTAAAAAAATATCACAAAATAGATAATCCAGCGCGCATGTCGACCTCCC
TGGACCTCCTGACCAAAACCGCATCGTTACAGCGGAGAGAGGTGGTTCCAAAGGTCAGGGACAAAACCACCACTGCAGTAGACTTTATTCCACC
AATCACTGCTGTTGAGCCTGTCTACCATAACCTCCACCATATCCAGCTTGCCCGTTCCCTTGATGATTCCCATAGCCATCTGGAACATCAGCAT
AGCCTCCGCCATGGCTGTTAGGACGCCCCCCGACAGCACCATAACCAGGTTGTGCTCCATAAGAGGAATCATTTCCACCGTAGCCATAACCCTG
ACTGCCATAACCTGCAGACGCAGCACCTCCTTGACCCATCACTGCTGAACCTGAACCAGAACCACCCCAAGGAGCAGGAGCAGCAGCAGCATTT
CCATATCCCACGTTGTTACCGTAGCCCGATGGTGCTTGACCTTCCCATGAAGGTCTCGGACCACTTCCAAACCCAGCTCCAGGGCCACCAGGAT
TCCCGTAAGGCGCGCCAGATGGATTCCCATACCCTCCAAAACCCCCATAACCTACACCGTTACTTCCATAACCATAACCAGTACCATACCCAGA
AGCAGCACCATAAGGAGGATAACCACTTCCCGCGTTTGAGGCTGCATATATCTACTGGAATCAACACGACCCTCGTAGCCACTTCCACCATATC
CCGGGAAACCACAACTACTACCACGACCACCACCCACCGCCGCTGGCTATCCCAGGGTTAGCGTCTTTAGGAAGAGCTCTTTTAACTTCCACTT
GCTTACCGCTCAAATCATGGAAAGTCTTGTGCAAAACAAGGTCAACCGAATCCTCAGAGTCGAACGAAACAAACCCAAACCCTCTAGGACGTTG
TGTAGCCTGGTCAATCATAATGACCGCATCGCTCACAGGGCCGTAAGTCTCGAAGTAAGCTCTAAACTCATCTGACGTCAAAGCAGGAGGCAAA
CCACCAACAAATATCTTCTTGGTCCTAACGTTAGCACCACCACCACCACTATCAAAACTCCTATTACCATTAAAACTCCCTTGTCTCCCTGCAG
GACTCTGCTCGTCTCTAGACATTGCTCTCTTCACATCAACATCTCTATTGTCGATATGGTGCTTGTCCTGAAGAACTCTATCGATAACGGCGGG
ATCGGAGAACGCGACGAATCCGAATCCTCTGGGACGACCTGTAGCTTTGTCTCGCATGACAGTCACCTGTGAAACCTCTCCGAAATTGCTGAAG
TACTCTCTCAGAAGGTTCTCGTCGGTTTCCCACGAAATGCCGCCGATAAAGAGCTTTCCCTGATCTGATTCCATTGCTTAGGCTGTCTCACTCC
ACGCTCTCGTTATACCCAAAAATGATAAGCCCTAGACTCGGCTCCGATTAAATCCCTCCCGGTGAAGAAGGGGAAAGGAGGTAGTGTCCCGAGA
AATTTAGGGTTTTGGATCGTGAAATCGGGTGTGAGCC |
Primers for UN13276 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCATCTGACGTCAAAGCAGG |
59.984 |
20 |
GAGTCCTGCAGGGAGACAAG |
59.986 |
20 |
126 |
1102 |
1227 |
2 |
TCATCTGACGTCAAAGCAGG |
59.984 |
20 |
AGAGTCCTGCAGGGAGACAA |
59.986 |
20 |
127 |
1102 |
1228 |
3 |
CAATCATAATGACCGCATCG |
59.914 |
20 |
GAGTCCTGCAGGGAGACAAG |
59.986 |
20 |
182 |
1046 |
1227 |
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