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Simple sequence repeat (SSR)
>UN01319
ATTAAGAAAACACTTTGTACTCATGCGGCAACAGAGTTTTTATTACAAACACACTCATAAAGATGCTTTTAATACCTAGCGCCAAAGACGGAAC
AAAGCACAACAAGAAAATCAAATACTCCTAGAACAATCAAAACAACATACCCATTTATTCATCTCTCTCTCTCTCTCTCTCTCTCTCTTCGGAC
ATAACTTAAAATCTGACAAAGAAACGGCCCCATTATATTATTTCGAGGTTTTTTTTGGGTCCACATTTCTAATACAGCAAAGCATCAGAAGATG
CCATGAGAGGCTGGTTCATCATATGAAACATGTTCATATTCATCTGATTCACGAGGAAGTCATCAGACTCTGGACCGGTCAGAGGGTTCGGACA
AACCCCGTTGGTGTTGTCGAGGAAACCGATGATGTCGTTGAGAGATTGGAGCCGGTGGCTGAGTTCATCGAGCTGAGCTCTGAGAACAGAGTTC
TCTGCTTCAACGGCCAAGTAGTGCTGCGTCGTGATGCTGACACTTGTCACGATCTCGCTGTTCTCTTTCTTGAGCTGGTTTACCTGAGCCGTTA
GATCGTCCAGGAGCTTCTGTTTCTTCATCCTTGATCTCCTCGCTGACTCACGGTTTGAGAGCATCCTCTTACGTTTCCTCTGCTCCATGAGATT
CTCCTCTGACCCGGAAGAGGAGAATCTCATGGAGCAGAGGTTGAATCGCCGACGAAGTGT |
Primers for UN01319 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTTGTACTCATGCGGCAAC |
59.347 |
20 |
TGGCATCTTCTGATGCTTTG |
59.948 |
20 |
273 |
13 |
285 |
| 2 |
CAAAGACGGAACAAAGCACA |
59.881 |
20 |
GATGAACCAGCCTCTCATGG |
60.622 |
20 |
220 |
83 |
302 |
| 3 |
CGGAACAAAGCACAACAAGA |
59.881 |
20 |
GATGAACCAGCCTCTCATGG |
60.622 |
20 |
214 |
89 |
302 |
|
|
