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Simple sequence repeat (SSR)
>UN13382
AGAGTTTTAGAAAAGAAAGAAACCATCTTTGATTTGAATAGAATACAATACCACACACTCCTCTTTTTTTTATCCAAAAAGTCGGCAAATCATT
GTTTTGTTTGATTGATTCTCTGGGAACTGATTGAGCAGAGGAGGGGAGATTAATGGGTGATCATCATCATCATCATCGCATCATCAGAGTCTAC
TACTTAGCCTTTGCTATCTTACTTTTACTTTTAGGGGAGGGAAATGCATTTGGAGCAGACAATCTTTCTAATCAGAAGCTGACCTCACCAATTC
TCCAGGATGAGATTGTGAAGCAAGTCAATGAGAATCCAAAGGCTGGATGGAAAGCTGCTTTTAATGATCGCTTTGCTAACTCCACCGTTGCAGA
GTTTAAGCGCCTCCTCGGTGTTAAACCATCACCTAAGAACGCATTCTTAGGTGTACCTGTTGTAAGCCATGACATCTCCATCTCTCTCAAGCTT
CCTAAACAATTTGACGCTAGAACCGCTTGGTCTCAGTGCTCCAGTATTGGAAGGATCCTAGATCAGGGTCACTGTGGTTCTTGCTGGGCATTTG
GGGCTGTAGAATCATTGTCTGACAGGTTCTGCATCAAATATAACATGAATATTTCTTTATCAGTCAATGATCTCTTAGCATGTTGTGGATTCCT
TTGCGGTCAAGGCTGTAATGGTGGCTACCCTATTTCCGCCTGGCGATACTTTAAGCACCACGGTGTAGTCACCGAAGAGTGTGATCCATACTTT
GACAATACTGGATGCTCACACCCGGGATGCGAACCCGCATACCCTACACCAAAATGTGTGAGGAAATGTGTTAGTGGAAACCAGCTTTGGCGTG
AATCAAAACACTATGGTGTTAGCGCCTACAAAGTCAGGCATGACCCTCAAGACATTATGGCTGAAGTTTACACAAACGGACCTGTTGAGGTTGC
CTTTACCGTTTACGAGGACTTTGCGCATTACAAATCTGGAGTGTACAAGCACATAACAGGTGCTAACATTGGAGGTCATGCTGTCAAGCTTATT
GGCTGGGGAACTTCTGATGATGGCGAAGACTATTGGTTGCTTGCAAATCAATGGAACCGAAGCTGGGGTGATGATGGTTACTTCAAGATCAAGA
GAGGAACGAACGAATGTGGAATCGAACACGGTGTTGTAGCCGGTTTGCCTTCAGACAGGAACGTCTTTAGAGGTGTAAATACTTCCGATGATGT
TCTAGTTTCCTCATTTTAAAACTACAAAATGAGAAAACAAAAGACGTGTCTCGACTCTCTCTCTCTCTCTCTCTGTAATATAATGTAATTTGCT
TCTTGTTTCCAGTGAAAAGAATCAAAAAGATTCTAATAAACCCAAACAAAAGTATATTAACTACAATTAATACCATTTAGCTTTTGTTCATGCT
CAGTTTTACATATTAATTTATACTGTTTTCATTCTGC |
Primers for UN13382 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AATCAATGGAACCGAAGCTG |
60.074 |
20 |
TTCACTGGAAACAAGAAGCAAA |
59.898 |
22 |
253 |
1080 |
1332 |
2 |
AATCAATGGAACCGAAGCTG |
60.074 |
20 |
TTTCACTGGAAACAAGAAGCAA |
59.898 |
22 |
254 |
1080 |
1333 |
3 |
AATCAATGGAACCGAAGCTG |
60.074 |
20 |
TTTTCACTGGAAACAAGAAGCA |
59.898 |
22 |
255 |
1080 |
1334 |
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