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Simple sequence repeat (SSR)
>UN13423
GGGCCCATTACCTTTTGTTCATTTCGTACCAGTGCGAAGAGAGAGAGAGGAGACGATCTTTCTTTCCCAACTGAAACTCTCGACGTCAAGTTGC
GTAGCCGTCGTCGCTCTTGCCGAGACTCGAAATCCCTAACTCCCTCGTATCTTTTCTGGATCGTCGAAGATGGTAGCTGATAGCAAATCCGACC
TTTCGTTGCCCAAAACATTCGCCTGCAGCGCCTTCGCTGCCTGCGTCGCCGGGGTGTGTACGATTCCGTTGGACACTGCGAAGGTTAGGCTTCA
GCTTCAAAAGTCTGCCGTAGCTGGAGATCTCACTCTGCCTAAGTATCGAGGGTTGCTGGGAACTGTTGGTACCATTGCAAGGGAAGAAGGGCTT
CGTTCGCTATGGAAAGGTGTTGTTCCTGGATTGCATCGCCAATGCTTGTTTGGTGGTCTAAGGATCGGAATGTATGAGCCGGTCAAAAACTTGT
ACGTTGGGAAAGATCATGTAGGTGATGTTCCGTTGAGCAAGAAAATCCTTGCTGGTTTGACAACAGGCGCGCTGGGTATCATGGTGGCGAACCC
CACAGATCTTGTGAAAGTTAGACTTCAGGCTGAAGGGAAACTACCTGCAGGTGTGCCAAAACGGTATTCTGGATCGTTGAATGCGTATTCAACT
ATTGTTAGACAGGAAGGAGTTCGAGCTCTTTGGACTGGTCTTGGACCTAACGTTGCCAGAAACGCAATCATCAATGCTGCTGAACTAGCGAGTT
ACGATCAAGTGAAGCAGACAATCTTGAAGATTCCAGGTTTCACTGATAACGTTGTCACACATATTCTCTCTGGACTAGGAGCAGGATTCTTTGC
TGTCTGCATTGGTTCCCCCGTTGACGTGGTTAAGTCGAGAATGATGGGAGATCCTTCTTACAAAGGCACTATTGACTGCTTCGTTAAAACTCTG
AAGGCGGACGGTCCTATGGCATTCTACAAGGGTTTCATCCCCAACTTTGGACGTCTTGGCTCATGGAATGTCATCATGTTTTTGACCCTTGAAC
AGGCAAAGAAGTATGTCCGGGAACTAGATTAGTCCAATAAACACTGAGAAACAGAACATTAAGCAGAGAGAGAGAGAGAGAGAGAATAAGAGCA
ACACTGTTTTCTTCTTTAATTTCGGTGGTCGAGAGAGGCCAAAACTTCATTGAATATTGTTTTCGGAATAGAGAGTCGTTTTCAAGCAAAACTA
TAAAATAAATTTATGTTGGTTGCTCAAAATAAAATTTCTTTTGGGATATAGACTGTACTGTTAAAACATTTATCAAAAGGATACAATTTCTTCC
CTTGCGCAAAACTGAAAAACCAAAAAACAAAAACAAAAACTCCTGAAAAAAAAAGAACTGGAGACAAAGAGACAATCTCAGCTCAGTTTCTTAT
ATTCTGGATAAGCCCATATCTTGAATCTCAGGTAAAGCTCTTTAGCTTTGTTGTAAATGAGCACAATAAATCCATCTATGTTATCCTCGTATCT
CTCATAAAAAGCTGGAACGGCCATCACCACCAAAATCCCAAAGTGGCAAAGTGTTTGAAAATCCATGAGGCTTCCAATGACTGCTATGAAAAAC
AAATAAACTGCTACTTTGATAAACAGCTCTGAGTCTCTTCCCATTGCAATGTCATACGAGACTTGAAACAGTTTATTCAAATGGATGCCCAGCA
ACTTGGAAGCTTCTTCAGCCATTGCTTCACTTACTTGAAACTCTGGTAATGGCGGTGACGGCCTGTTGAGGATGGATGCAAATTTGGA |
Primers for UN13423 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GACGTCTTGGCTCATGGAAT |
60.081 |
20 |
TGAAGTTTTGGCCTCTCTCG |
60.508 |
20 |
188 |
990 |
1177 |
| 2 |
TTTTTGACCCTTGAACAGGC |
60.088 |
20 |
TGAAGTTTTGGCCTCTCTCG |
60.508 |
20 |
159 |
1019 |
1177 |
| 3 |
CGTTAAAACTCTGAAGGCGG |
59.876 |
20 |
TGAAGTTTTGGCCTCTCTCG |
60.508 |
20 |
250 |
928 |
1177 |
|
|
