 |
Simple sequence repeat (SSR)
>UN13456
ACTGTTTTCAAGAAAGCTGGTGTACCTTCAGCCTCGGCCAACATATGTGTGGGAGTATGCAACCTCTTAGGTTCTACAGTAGCGGTGGTTTTGA
TGGATAAGCTGGGGAGAAAAGTATTGCTTATTGGGAGTTTTGCGGGCATGGCAGTATCGCTGGGTCTCCAGGCAATGGCATATACTTTGTTTTC
ATCAACTTTTGGAACCTTGTTTCTCTCTGTCGGAGGAATGCTACTGTTTGTGTTGTCTTTTGCAACTGGAGCTGGTCCTGTTCCAAGTATTCTC
CTGTCTGAGATATGCCCTGGTCGTCTTCGGGCAACAGCATTGGCTGTTTGTCTTGCTGTTCACTGGGTAATAAACTTCTTCGTTGGGCTGCTGT
TTCTAAGAATGCTGGAGCAACTAGGTTCGGTGCTTCTAAATGCAATCTTCGGCTTCTTCTGCGTGGTGGCAGTTATCTTTGTGCAGAAGAACGT
GATCGAGACTAAAGGGAAAGCCTCCAAGAGATAGAGATCAGTCTGCTCTCTGCCACCAGCCAGTGATCTTTTTCTTCGCACTTGCTCTTCTGCC
ACTTTATGTAAGACTAATATGGAATTAGGAGCTTAGTAGTAAGTAGGCACCATATATAAGGAAATGGATTTATTCAAGTATAGCCGACATTCCA
ATTTGATTTTTGCTAATAAAGTAAGACCGAACGGTTTACAACCCTTTTTAATGTACAAAGGAAGTTCATATCTATCCCTAAAACTTGTTTCTTC
CACAGTTTTTATCCTTCACATGTTCTTGTTCCTTTATTGTATAGCCTGTTTGCAAACACCCGTTCTAATCATGTTTCAGTAATATTTGTAATTC
TTCACCCATTCATTTGCCACTTGAAACACCTTCCCGTTGTATGGCAACCACAGGCTCATTACATCTAAGACACCGGAATGATGCTGCCGAAGCG
CAGCGGGTCCTTATACAGTAGTAACAGTACCTGTGCTGGCAAGGTAGAGCAATAAACGGAATTGCAGGATCCACTTGGCAAATGGGGCAAGCAA
CTGTATCCTCTTTATTGTTTGAGGACCTTTCCTTGGCAAATGGACTTAGAATATTCTTAATAGCTGAAGAGTTGAGCAGCGGCAGAAGCAGCAA
AAGCATTTCAGAAAATTCATTCCAGACAAGTTGGCGATTCATGTACTCGAAGCTGACAGATCGGTTCATATGGGGACTATTATAGACAAGCCTT
GCTCTTAAAGCTTTTTCAATGAGGTTCCTATACCTTCCGGTATAAAGAAATGACAAGAGGTTAAGAAAAGAAGCAGCTTTATAGAAGCCTTCGA
TGCGTTGAATGAGGGTCCAGAGCCGCCTAGCCAGTGGTCTCTGCTCAGAATCACCCCATCTACGGAAAGCAGAGAATGACTGCAAGCGGGAGAA
GAGGTACTGACCACCAACTGAGGCAACACAGTACCAAATCTTTTGAGGAGCAGAAAGTCCCGGGCCTTCGAGTCCTGTTCTGACTTTCCCAGAG
AGTTGTGCAGGAGTAACTCGTTCATCTCTGTATCTAAGATTCATGAGAGCATTTCCAGGGGTAGGTTTGTCAACCCAAATAGAGAATCTCCAAA
TTAGAAACTCTAGGAATGCATCCAGTTCTGGTTCGTATTGAAACATCATTCCTGGCTAATCCCCCCCACAACCAAACAAACAAACAAACAAAAG
ATGATCCGTGAAGTGATTTAAAAAAAAAGAAAGGAACTGAATTGAATACCTTAGCCAAAGTGAAAACCTTAACCAACTGTTCTTTCAACATGGC
AGACATTTCAACATCTAGTCTTGCAGCGTCGAACTGATTTACTCTTGAGATTGCAACCGCTATAACTGATCGGTGGGAAGAGAGGAGCGATTGA
GATTCGGGGAGTAAGCGGTCATGAGAACGAATCCAAGCATCGTCGGGAGGCGGAGGCGCCGTCATTGGCAAAGCTCTGCGAACTGCCACCGTCT
TATCCAATTTTCTTCCC |
Primers for UN13456 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCATTCCTGGCTAATCCCC |
60.117 |
20 |
TACTCCCCGAATCTCAATCG |
60.029 |
20 |
251 |
1643 |
1893 |
| 2 |
ATCATTCCTGGCTAATCCCC |
60.117 |
20 |
TTCGACGCTGCAAGACTAGA |
59.888 |
20 |
177 |
1643 |
1819 |
| 3 |
AGCATTTCCAGGGGTAGGTT |
59.827 |
20 |
TTCGACGCTGCAAGACTAGA |
59.888 |
20 |
268 |
1552 |
1819 |
|
|
