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Simple sequence repeat (SSR)
>UN13509
GGGTTTTCACAAGGCGTACAAAGGACAAACACGTAGCAGCAGCTCATTCCTCTCTCTCTCTCTATTTTCAAACCCTACGAGAGATCTTCTTCGT
CAAAAGAATCGAGCAATGAAAGGAGGTAAATCAAAGGCGGATACCAAGAGCTCTAAGCTCGCTGTGAACAAGAAGCCTGCAAAGGCAAGCAAAG
CGGCGGCTAAGGATCCTAACAAACCAAAGAGGCCTTCCAGTGCCTTCTTCGTTTTCATGGAGGATTTCCGTCAGACTTACAAGAAGGATCATCC
CAATAACAAATCTGTTGCTGCTGTTGGAAAAGCTGGTGGACAAAAGTGGAAATCCTTGTCTGACACTGAGAAGGCTCCCTACGTTGCTAAGGCT
GACAACCGCAAAGTCGAGTATGAGAAGAACATGAAAGCCTACAACAAGAAGCTGGAGGAAGGTCCAAAGGAGGACGAGGAGGAATCTGACAAGT
CCGTGTCTGAGGTTAATGATGAGGATGATGCCGATGATGGGAGTGATGAGGAGGAAGACGATGACTAAGTTTAGTAGCATAATATAGGACGCTG
CAAGGATCTCAAGCATGTTCTTTCTTGTTTTCTCTTATAATGTTAACGAAGTTGTTTTAAATGGTTTTTCTTTTCTTACTGATTCTACGTGTAA
TGGAAAAAGCGAGTGTAATGAGAGATTTGCAGCTCAATATTAAACCATTTAGCTTTTTTTTTTTAAAAT |
Primers for UN13509 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CACAAGGCGTACAAAGGACA |
59.758 |
20 |
CCTTTGCAGGCTTCTTGTTC |
59.993 |
20 |
172 |
8 |
179 |
| 2 |
CACAAGGCGTACAAAGGACA |
59.758 |
20 |
ACTGGAAGGCCTCTTTGGTT |
60.11 |
20 |
222 |
8 |
229 |
| 3 |
CACAAGGCGTACAAAGGACA |
59.758 |
20 |
GACGGAAATCCTCCATGAAA |
59.871 |
20 |
253 |
8 |
260 |
|
|
