 |
Simple sequence repeat (SSR)
>UN01333
CGCCAAAAATATTTTAGCAAAAACATAAATTAAGAACATAAAAATCTTTTGCTCAAGAAAAAAGAACATAAATATCTAATAAAAGAGAGTTGTT
TTAAAAAAGTTAGCTACAAAAGAAAGAAAATTAGAAAGAAAAAGGAAACGAAGATGGTGAGAAGAAGAAGAAGAAAGAGTCCATTAATCATTCC
AATGTTTTCAAGAGCCTGAAGAGACCAGCTGCTTCACGAATCCGTGAAAAGTCAATGCAGAAAGCTTGAACTTCTATAAATAGATCCTTCACGT
CGATGTTGTTGTTACGAATTAAACTTTGCAAGAAGACGCAAACAAGTCGAACAAGCCTATTCTGCATGTACTTGTCTTGCTTGGCGTTCTCACA
AGACGATATGCAATTAGTGATGTACACGCGAATAAATTCCTTGGGAAGCTCAACTGCAGTTGTGAGTCTGTTCACAACTTCCATCGAGTGCAAG
CTCATGTCCATACTTACAAGAGCTGCGAAATAGTCAACAATCTCCGGAGAGTTAATCAACTTGGTCAGAATCTCAACTGCTATTTGAGGATTGT
GCTCTACTAATTGCGGCAGCTTCCGTGGAGTTATTCCACAGTGATAGACAAGCTTTGGGTCATTTGCCAATGACGTAGTGATGTTCTCTTGCTC
CGTAGGTGAAAGTGTCACCTTCAAACCCTTAACAAGTAAGTCCCTAACTGTTGAGCCTCTGCTAGTGTCAGCACACATTTTATCGTCCCAAATA
AGCTCATGCTTGTTATCAGGATCAATCCAAAGCAACTCGCTCTGATGAACTGGGTACCTAGGAGGACATGGACGGATCCACCTAGGAGCTAATC
CCCCCGTTGTCAAACTTCCCAATATTCCAGTTACGGCCACATCTCTGTCACCACATCCAATTTTGGGATTCCCACCAGGTTGCACGTCAAACTC
TGGAGAGTTAGGATCGCACCCACGAGGAACATCAGGATCATGCAATAGCTTTTTGACGGCATAGTCTGCAGCTACGTGACTAGGTGGTCCAGAA
CCAGCTTTGTCGCCATACTCTCGTTGCAGCTCTCCAAGCTCCGGAAAATCATGAGTTGAAGGATCAAACGATTTGATATAATCAACAGCTGACA
GTTTGAGAATCTCTTTAGATTTGTTGTAGCTATTCCATTGTAAGAGGTGGAGAATAAATGCTCTCTCATGCTTTTCCACCTGCTCATTACAAGC
AGCATTCATCATATCAGATACGAACGGGTTTACAGACGGTTTCTCGGAAGGATAACACTGGTACATGATAGCAAACGCAATTATACGATCAGTA
CTCCGTAGCAACTTCAGATCCTGTAAGAGCAGGGAAAGAGAGTAGCAGGCAGTGAAGTGGCGATCGCGTGGGAACTTGGAGTTGAATTCCGCCA
CGACGTCTTCGATAGGCCGGAGATCGGACTTGATCAGAGACCACACAGTCGCCGTTTCTTCTATATTCATTATCATACTCGCCACTGTTGGATC
AATCTCGCGGCGCTTAGACATTTGAGATTCCTTATTCAATATCTAGTTTGGATGGATGCTTATTTTTTTTCTCTTTCAAAGTTTCTTCC |
Primers for UN01333 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAAGAAAAAGGAAACGAAGATGG |
59.995 |
23 |
CGCCAAGCAAGACAAGTACA |
60.05 |
20 |
240 |
129 |
368 |
| 2 |
AAAGAAAAAGGAAACGAAGATGG |
59.995 |
23 |
TTGTTCGACTTGTTTGCGTC |
59.888 |
20 |
208 |
129 |
336 |
| 3 |
AAAGAAAAAGGAAACGAAGATGG |
59.995 |
23 |
CAACAACATCGACGTGAAGG |
60.152 |
20 |
165 |
129 |
293 |
|
|
